Protein–RNA interactions for Protein: Q99J95

Cdk9, Cyclin-dependent kinase 9, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk9Q99J95 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Cdk9Q99J95 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
Cdk9Q99J95 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Cdk9Q99J95 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Cdk9Q99J95 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
Cdk9Q99J95 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Cdk9Q99J95 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Cdk9Q99J95 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cdk9Q99J95 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
Cdk9Q99J95 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cdk9Q99J95 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Cdk9Q99J95 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cdk9Q99J95 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Cdk9Q99J95 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cdk9Q99J95 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC20.92■□□□□ 0.94
Cdk9Q99J95 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Cdk9Q99J95 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Cdk9Q99J95 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Cdk9Q99J95 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Cdk9Q99J95 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Cdk9Q99J95 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Cdk9Q99J95 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cdk9Q99J95 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cdk9Q99J95 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cdk9Q99J95 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
Cdk9Q99J95 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Cdk9Q99J95 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cdk9Q99J95 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cdk9Q99J95 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Cdk9Q99J95 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Cdk9Q99J95 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.93
Cdk9Q99J95 Gm11175-201ENSMUST00000116172 543 ntBASIC20.89■□□□□ 0.93
Cdk9Q99J95 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Cdk9Q99J95 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC20.89■□□□□ 0.93
Cdk9Q99J95 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
Cdk9Q99J95 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cdk9Q99J95 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cdk9Q99J95 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cdk9Q99J95 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cdk9Q99J95 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Cdk9Q99J95 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
Cdk9Q99J95 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cdk9Q99J95 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC20.87■□□□□ 0.93
Cdk9Q99J95 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC20.87■□□□□ 0.93
Cdk9Q99J95 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cdk9Q99J95 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
Cdk9Q99J95 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cdk9Q99J95 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cdk9Q99J95 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cdk9Q99J95 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC20.87■□□□□ 0.93
Cdk9Q99J95 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cdk9Q99J95 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
Cdk9Q99J95 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Cdk9Q99J95 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cdk9Q99J95 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cdk9Q99J95 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cdk9Q99J95 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cdk9Q99J95 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC20.85■□□□□ 0.93
Cdk9Q99J95 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Cdk9Q99J95 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cdk9Q99J95 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cdk9Q99J95 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Cdk9Q99J95 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Cdk9Q99J95 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Cdk9Q99J95 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Cdk9Q99J95 Gm44428-201ENSMUST00000204474 874 ntBASIC20.84■□□□□ 0.93
Cdk9Q99J95 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Cdk9Q99J95 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Cdk9Q99J95 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Cdk9Q99J95 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
Cdk9Q99J95 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Cdk9Q99J95 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
Cdk9Q99J95 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC20.83■□□□□ 0.93
Cdk9Q99J95 Mir6538-201ENSMUST00000183713 110 ntBASIC20.83■□□□□ 0.93
Cdk9Q99J95 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Cdk9Q99J95 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.92
Cdk9Q99J95 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
Cdk9Q99J95 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
Cdk9Q99J95 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC20.83■□□□□ 0.92
Cdk9Q99J95 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Cdk9Q99J95 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Cdk9Q99J95 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC20.82■□□□□ 0.92
Cdk9Q99J95 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Cdk9Q99J95 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Cdk9Q99J95 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
Cdk9Q99J95 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Cdk9Q99J95 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Cdk9Q99J95 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Cdk9Q99J95 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC20.81■□□□□ 0.92
Cdk9Q99J95 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Cdk9Q99J95 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Cdk9Q99J95 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
Cdk9Q99J95 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Cdk9Q99J95 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Cdk9Q99J95 AC117769.4-201ENSMUST00000225679 685 ntBASIC20.8■□□□□ 0.92
Cdk9Q99J95 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Cdk9Q99J95 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Cdk9Q99J95 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Cdk9Q99J95 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Cdk9Q99J95 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 79 ms