Protein–RNA interactions for Protein: Q99J59

Tspan1, Tetraspanin-1, mousemouse

Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tspan1Q99J59 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Tspan1Q99J59 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Tspan1Q99J59 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC20.83■□□□□ 0.93
Tspan1Q99J59 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
Tspan1Q99J59 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Tspan1Q99J59 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Tspan1Q99J59 Gm14117-201ENSMUST00000122417 843 ntBASIC20.82■□□□□ 0.92
Tspan1Q99J59 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Tspan1Q99J59 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Tspan1Q99J59 Gm43403-201ENSMUST00000198011 1786 ntBASIC20.82■□□□□ 0.92
Tspan1Q99J59 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Tspan1Q99J59 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Tspan1Q99J59 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Tspan1Q99J59 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Tspan1Q99J59 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC20.81■□□□□ 0.92
Tspan1Q99J59 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Tspan1Q99J59 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Tspan1Q99J59 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC20.81■□□□□ 0.92
Tspan1Q99J59 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC20.8■□□□□ 0.92
Tspan1Q99J59 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
Tspan1Q99J59 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Tspan1Q99J59 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Tspan1Q99J59 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC20.8■□□□□ 0.92
Tspan1Q99J59 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC20.8■□□□□ 0.92
Tspan1Q99J59 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Tspan1Q99J59 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC20.8■□□□□ 0.92
Tspan1Q99J59 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Tspan1Q99J59 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Tspan1Q99J59 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Tspan1Q99J59 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Tspan1Q99J59 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Tspan1Q99J59 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Tspan1Q99J59 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC20.79■□□□□ 0.92
Tspan1Q99J59 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Tspan1Q99J59 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Tspan1Q99J59 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Tspan1Q99J59 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
Tspan1Q99J59 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Tspan1Q99J59 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC20.78■□□□□ 0.92
Tspan1Q99J59 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Tspan1Q99J59 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC20.78■□□□□ 0.92
Tspan1Q99J59 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Tspan1Q99J59 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Tspan1Q99J59 Gm17641-201ENSMUST00000166328 2350 ntBASIC20.78■□□□□ 0.92
Tspan1Q99J59 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Tspan1Q99J59 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Tspan1Q99J59 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC20.77■□□□□ 0.92
Tspan1Q99J59 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Tspan1Q99J59 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Tspan1Q99J59 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Tspan1Q99J59 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Tspan1Q99J59 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Tspan1Q99J59 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Tspan1Q99J59 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
Tspan1Q99J59 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Tspan1Q99J59 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Tspan1Q99J59 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Tspan1Q99J59 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Tspan1Q99J59 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Tspan1Q99J59 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Tspan1Q99J59 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Tspan1Q99J59 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Tspan1Q99J59 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Tspan1Q99J59 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Tspan1Q99J59 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Tspan1Q99J59 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC20.75■□□□□ 0.91
Tspan1Q99J59 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC20.74■□□□□ 0.91
Tspan1Q99J59 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Tspan1Q99J59 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Tspan1Q99J59 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Tspan1Q99J59 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC20.74■□□□□ 0.91
Tspan1Q99J59 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Tspan1Q99J59 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Tspan1Q99J59 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Tspan1Q99J59 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Tspan1Q99J59 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Tspan1Q99J59 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Tspan1Q99J59 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Tspan1Q99J59 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Tspan1Q99J59 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Tspan1Q99J59 Gm5913-201ENSMUST00000119397 1399 ntBASIC20.72■□□□□ 0.91
Tspan1Q99J59 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Tspan1Q99J59 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Tspan1Q99J59 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Tspan1Q99J59 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Tspan1Q99J59 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Tspan1Q99J59 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Tspan1Q99J59 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC20.72■□□□□ 0.91
Tspan1Q99J59 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Tspan1Q99J59 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Tspan1Q99J59 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Tspan1Q99J59 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Tspan1Q99J59 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC20.71■□□□□ 0.91
Tspan1Q99J59 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC20.71■□□□□ 0.91
Tspan1Q99J59 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Tspan1Q99J59 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Tspan1Q99J59 Gm44949-201ENSMUST00000206423 1450 ntBASIC20.7■□□□□ 0.9
Tspan1Q99J59 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Tspan1Q99J59 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
Tspan1Q99J59 Gm22238-201ENSMUST00000175222 88 ntBASIC20.7■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 59.3 ms