Protein–RNA interactions for Protein: Q8VHQ4

Rab40c, Ras-related protein Rab-40C, mousemouse

Predictions only

Length 281 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab40cQ8VHQ4 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rab40cQ8VHQ4 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Rab40cQ8VHQ4 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC17.01■□□□□ 0.31
Rab40cQ8VHQ4 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rab40cQ8VHQ4 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rab40cQ8VHQ4 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Rab40cQ8VHQ4 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rab40cQ8VHQ4 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rab40cQ8VHQ4 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC17■□□□□ 0.31
Rab40cQ8VHQ4 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rab40cQ8VHQ4 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Rab40cQ8VHQ4 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC17■□□□□ 0.31
Rab40cQ8VHQ4 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rab40cQ8VHQ4 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rab40cQ8VHQ4 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC17■□□□□ 0.31
Rab40cQ8VHQ4 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC17■□□□□ 0.31
Rab40cQ8VHQ4 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rab40cQ8VHQ4 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC17■□□□□ 0.31
Rab40cQ8VHQ4 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Rab40cQ8VHQ4 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Rab40cQ8VHQ4 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rab40cQ8VHQ4 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Rab40cQ8VHQ4 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rab40cQ8VHQ4 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rab40cQ8VHQ4 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rab40cQ8VHQ4 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rab40cQ8VHQ4 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Rab40cQ8VHQ4 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC16.99■□□□□ 0.31
Rab40cQ8VHQ4 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rab40cQ8VHQ4 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rab40cQ8VHQ4 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rab40cQ8VHQ4 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rab40cQ8VHQ4 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rab40cQ8VHQ4 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rab40cQ8VHQ4 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rab40cQ8VHQ4 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rab40cQ8VHQ4 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rab40cQ8VHQ4 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rab40cQ8VHQ4 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Rab40cQ8VHQ4 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rab40cQ8VHQ4 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rab40cQ8VHQ4 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Rab40cQ8VHQ4 Gm5987-201ENSMUST00000196433 1151 ntBASIC16.98■□□□□ 0.31
Rab40cQ8VHQ4 Gm34220-201ENSMUST00000223001 2709 ntBASIC16.98■□□□□ 0.31
Rab40cQ8VHQ4 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rab40cQ8VHQ4 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rab40cQ8VHQ4 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rab40cQ8VHQ4 Gm4430-201ENSMUST00000192413 1943 ntBASIC16.98■□□□□ 0.31
Rab40cQ8VHQ4 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rab40cQ8VHQ4 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
Rab40cQ8VHQ4 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
Rab40cQ8VHQ4 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rab40cQ8VHQ4 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Rab40cQ8VHQ4 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rab40cQ8VHQ4 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rab40cQ8VHQ4 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Rab40cQ8VHQ4 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Rab40cQ8VHQ4 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Rab40cQ8VHQ4 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Rab40cQ8VHQ4 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Rab40cQ8VHQ4 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Rab40cQ8VHQ4 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.3
Rab40cQ8VHQ4 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.3
Rab40cQ8VHQ4 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Rab40cQ8VHQ4 Gm5913-201ENSMUST00000119397 1399 ntBASIC16.95■□□□□ 0.3
Rab40cQ8VHQ4 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC16.95■□□□□ 0.3
Rab40cQ8VHQ4 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC16.95■□□□□ 0.3
Rab40cQ8VHQ4 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rab40cQ8VHQ4 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Rab40cQ8VHQ4 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rab40cQ8VHQ4 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rab40cQ8VHQ4 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rab40cQ8VHQ4 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rab40cQ8VHQ4 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rab40cQ8VHQ4 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Rab40cQ8VHQ4 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Rab40cQ8VHQ4 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rab40cQ8VHQ4 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rab40cQ8VHQ4 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rab40cQ8VHQ4 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rab40cQ8VHQ4 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Rab40cQ8VHQ4 Gm10616-201ENSMUST00000205285 2127 ntBASIC16.94■□□□□ 0.3
Rab40cQ8VHQ4 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Rab40cQ8VHQ4 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rab40cQ8VHQ4 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Rab40cQ8VHQ4 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Rab40cQ8VHQ4 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rab40cQ8VHQ4 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rab40cQ8VHQ4 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rab40cQ8VHQ4 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
Rab40cQ8VHQ4 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Rab40cQ8VHQ4 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC16.93■□□□□ 0.3
Rab40cQ8VHQ4 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC16.93■□□□□ 0.3
Rab40cQ8VHQ4 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Rab40cQ8VHQ4 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rab40cQ8VHQ4 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
Rab40cQ8VHQ4 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rab40cQ8VHQ4 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Rab40cQ8VHQ4 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC16.92■□□□□ 0.3
Rab40cQ8VHQ4 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 15.2 ms