Protein–RNA interactions for Protein: Q8K4Q6

Neil1, Endonuclease 8-like 1, mousemouse

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Neil1Q8K4Q6 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Neil1Q8K4Q6 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Neil1Q8K4Q6 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Neil1Q8K4Q6 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC18.12■□□□□ 0.49
Neil1Q8K4Q6 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Neil1Q8K4Q6 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Neil1Q8K4Q6 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC18.11■□□□□ 0.49
Neil1Q8K4Q6 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Neil1Q8K4Q6 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC18.11■□□□□ 0.49
Neil1Q8K4Q6 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Neil1Q8K4Q6 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC18.11■□□□□ 0.49
Neil1Q8K4Q6 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Neil1Q8K4Q6 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Neil1Q8K4Q6 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Neil1Q8K4Q6 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Neil1Q8K4Q6 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Neil1Q8K4Q6 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Neil1Q8K4Q6 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Neil1Q8K4Q6 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Neil1Q8K4Q6 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Neil1Q8K4Q6 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Neil1Q8K4Q6 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Neil1Q8K4Q6 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Neil1Q8K4Q6 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Neil1Q8K4Q6 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Neil1Q8K4Q6 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC18.09■□□□□ 0.49
Neil1Q8K4Q6 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Neil1Q8K4Q6 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC18.09■□□□□ 0.49
Neil1Q8K4Q6 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Neil1Q8K4Q6 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Neil1Q8K4Q6 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Neil1Q8K4Q6 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
Neil1Q8K4Q6 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Neil1Q8K4Q6 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC18.08■□□□□ 0.48
Neil1Q8K4Q6 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
Neil1Q8K4Q6 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Neil1Q8K4Q6 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Neil1Q8K4Q6 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Neil1Q8K4Q6 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Neil1Q8K4Q6 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Neil1Q8K4Q6 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Neil1Q8K4Q6 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Neil1Q8K4Q6 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Neil1Q8K4Q6 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Neil1Q8K4Q6 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Neil1Q8K4Q6 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Neil1Q8K4Q6 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Neil1Q8K4Q6 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Neil1Q8K4Q6 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Neil1Q8K4Q6 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Neil1Q8K4Q6 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Neil1Q8K4Q6 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
Neil1Q8K4Q6 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
Neil1Q8K4Q6 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Neil1Q8K4Q6 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Neil1Q8K4Q6 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Neil1Q8K4Q6 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Neil1Q8K4Q6 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Neil1Q8K4Q6 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC18.06■□□□□ 0.48
Neil1Q8K4Q6 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC18.06■□□□□ 0.48
Neil1Q8K4Q6 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Neil1Q8K4Q6 Gm5067-201ENSMUST00000170449 1009 ntBASIC18.06■□□□□ 0.48
Neil1Q8K4Q6 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Neil1Q8K4Q6 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Neil1Q8K4Q6 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
Neil1Q8K4Q6 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Neil1Q8K4Q6 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Neil1Q8K4Q6 AC164883.3-201ENSMUST00000227396 1774 ntBASIC18.05■□□□□ 0.48
Neil1Q8K4Q6 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Neil1Q8K4Q6 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Neil1Q8K4Q6 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC18.05■□□□□ 0.48
Neil1Q8K4Q6 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Neil1Q8K4Q6 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Neil1Q8K4Q6 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Neil1Q8K4Q6 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Neil1Q8K4Q6 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Neil1Q8K4Q6 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Neil1Q8K4Q6 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Neil1Q8K4Q6 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Neil1Q8K4Q6 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Neil1Q8K4Q6 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Neil1Q8K4Q6 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC18.03■□□□□ 0.48
Neil1Q8K4Q6 Gm10420-201ENSMUST00000121713 882 ntBASIC18.03■□□□□ 0.48
Neil1Q8K4Q6 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Neil1Q8K4Q6 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC18.03■□□□□ 0.48
Neil1Q8K4Q6 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC18.03■□□□□ 0.48
Neil1Q8K4Q6 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC18.03■□□□□ 0.48
Neil1Q8K4Q6 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Neil1Q8K4Q6 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Neil1Q8K4Q6 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Neil1Q8K4Q6 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Neil1Q8K4Q6 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Neil1Q8K4Q6 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Neil1Q8K4Q6 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Neil1Q8K4Q6 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC18.02■□□□□ 0.48
Neil1Q8K4Q6 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Neil1Q8K4Q6 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Neil1Q8K4Q6 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Neil1Q8K4Q6 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Neil1Q8K4Q6 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms