Protein–RNA interactions for Protein: Q8K3H0

Appl1, DCC-interacting protein 13-alpha, mousemouse

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Appl1Q8K3H0 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Appl1Q8K3H0 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Appl1Q8K3H0 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
Appl1Q8K3H0 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Appl1Q8K3H0 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Appl1Q8K3H0 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Appl1Q8K3H0 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Appl1Q8K3H0 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
Appl1Q8K3H0 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Appl1Q8K3H0 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC21.36■■□□□ 1.01
Appl1Q8K3H0 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Appl1Q8K3H0 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC21.36■■□□□ 1.01
Appl1Q8K3H0 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Appl1Q8K3H0 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
Appl1Q8K3H0 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC21.36■■□□□ 1.01
Appl1Q8K3H0 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Appl1Q8K3H0 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Appl1Q8K3H0 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
Appl1Q8K3H0 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Appl1Q8K3H0 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Appl1Q8K3H0 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Appl1Q8K3H0 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
Appl1Q8K3H0 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
Appl1Q8K3H0 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
Appl1Q8K3H0 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC21.34■■□□□ 1.01
Appl1Q8K3H0 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Appl1Q8K3H0 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Appl1Q8K3H0 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Appl1Q8K3H0 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Appl1Q8K3H0 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
Appl1Q8K3H0 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Appl1Q8K3H0 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Appl1Q8K3H0 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC21.33■■□□□ 1.01
Appl1Q8K3H0 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Appl1Q8K3H0 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Appl1Q8K3H0 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Appl1Q8K3H0 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Appl1Q8K3H0 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Appl1Q8K3H0 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1
Appl1Q8K3H0 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Appl1Q8K3H0 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Appl1Q8K3H0 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC21.32■■□□□ 1
Appl1Q8K3H0 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC21.32■■□□□ 1
Appl1Q8K3H0 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC21.32■■□□□ 1
Appl1Q8K3H0 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Appl1Q8K3H0 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
Appl1Q8K3H0 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Appl1Q8K3H0 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Appl1Q8K3H0 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
Appl1Q8K3H0 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC21.31■■□□□ 1
Appl1Q8K3H0 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Appl1Q8K3H0 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
Appl1Q8K3H0 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC21.31■■□□□ 1
Appl1Q8K3H0 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC21.31■■□□□ 1
Appl1Q8K3H0 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC21.31■■□□□ 1
Appl1Q8K3H0 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
Appl1Q8K3H0 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
Appl1Q8K3H0 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC21.31■■□□□ 1
Appl1Q8K3H0 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC21.3■■□□□ 1
Appl1Q8K3H0 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Appl1Q8K3H0 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC21.3■■□□□ 1
Appl1Q8K3H0 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
Appl1Q8K3H0 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Appl1Q8K3H0 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC21.29■■□□□ 1
Appl1Q8K3H0 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Appl1Q8K3H0 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Appl1Q8K3H0 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Appl1Q8K3H0 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
Appl1Q8K3H0 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Appl1Q8K3H0 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Appl1Q8K3H0 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Appl1Q8K3H0 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
Appl1Q8K3H0 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Appl1Q8K3H0 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Appl1Q8K3H0 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Appl1Q8K3H0 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC21.28■■□□□ 1
Appl1Q8K3H0 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Appl1Q8K3H0 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
Appl1Q8K3H0 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Appl1Q8K3H0 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Appl1Q8K3H0 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
Appl1Q8K3H0 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC21.27■■□□□ 1
Appl1Q8K3H0 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
Appl1Q8K3H0 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
Appl1Q8K3H0 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC21.26■□□□□ 0.99
Appl1Q8K3H0 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Appl1Q8K3H0 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Appl1Q8K3H0 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Appl1Q8K3H0 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Appl1Q8K3H0 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Appl1Q8K3H0 Gm9847-201ENSMUST00000052528 599 ntBASIC21.26■□□□□ 0.99
Appl1Q8K3H0 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Appl1Q8K3H0 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Appl1Q8K3H0 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Appl1Q8K3H0 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Appl1Q8K3H0 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC21.25■□□□□ 0.99
Appl1Q8K3H0 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Appl1Q8K3H0 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
Appl1Q8K3H0 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Appl1Q8K3H0 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 49.2 ms