Protein–RNA interactions for Protein: Q6PCM1

Kdm3a, Lysine-specific demethylase 3A, mousemouse

Predictions only

Length 1,323 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kdm3aQ6PCM1 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC25.41■■□□□ 1.66
Kdm3aQ6PCM1 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC25.41■■□□□ 1.66
Kdm3aQ6PCM1 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
Kdm3aQ6PCM1 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
Kdm3aQ6PCM1 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC25.41■■□□□ 1.66
Kdm3aQ6PCM1 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC25.4■■□□□ 1.66
Kdm3aQ6PCM1 AC164883.3-201ENSMUST00000227396 1774 ntBASIC25.4■■□□□ 1.66
Kdm3aQ6PCM1 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
Kdm3aQ6PCM1 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC25.39■■□□□ 1.66
Kdm3aQ6PCM1 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC25.39■■□□□ 1.66
Kdm3aQ6PCM1 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
Kdm3aQ6PCM1 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
Kdm3aQ6PCM1 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
Kdm3aQ6PCM1 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC25.39■■□□□ 1.66
Kdm3aQ6PCM1 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
Kdm3aQ6PCM1 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
Kdm3aQ6PCM1 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
Kdm3aQ6PCM1 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC25.39■■□□□ 1.65
Kdm3aQ6PCM1 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
Kdm3aQ6PCM1 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
Kdm3aQ6PCM1 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
Kdm3aQ6PCM1 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC25.38■■□□□ 1.65
Kdm3aQ6PCM1 Kdm3b-204ENSMUST00000224715 2032 ntBASIC25.38■■□□□ 1.65
Kdm3aQ6PCM1 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC25.38■■□□□ 1.65
Kdm3aQ6PCM1 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
Kdm3aQ6PCM1 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC25.37■■□□□ 1.65
Kdm3aQ6PCM1 Gm9847-201ENSMUST00000052528 599 ntBASIC25.37■■□□□ 1.65
Kdm3aQ6PCM1 Gm13241-201ENSMUST00000094493 780 ntBASIC25.37■■□□□ 1.65
Kdm3aQ6PCM1 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
Kdm3aQ6PCM1 Gm4430-201ENSMUST00000192413 1943 ntBASIC25.37■■□□□ 1.65
Kdm3aQ6PCM1 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
Kdm3aQ6PCM1 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC25.37■■□□□ 1.65
Kdm3aQ6PCM1 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC25.36■■□□□ 1.65
Kdm3aQ6PCM1 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
Kdm3aQ6PCM1 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
Kdm3aQ6PCM1 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC25.36■■□□□ 1.65
Kdm3aQ6PCM1 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
Kdm3aQ6PCM1 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
Kdm3aQ6PCM1 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
Kdm3aQ6PCM1 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC25.34■■□□□ 1.65
Kdm3aQ6PCM1 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC25.34■■□□□ 1.65
Kdm3aQ6PCM1 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
Kdm3aQ6PCM1 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
Kdm3aQ6PCM1 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
Kdm3aQ6PCM1 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC25.33■■□□□ 1.64
Kdm3aQ6PCM1 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.64
Kdm3aQ6PCM1 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Kdm3aQ6PCM1 Gm37415-201ENSMUST00000192265 2054 ntBASIC25.32■■□□□ 1.64
Kdm3aQ6PCM1 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
Kdm3aQ6PCM1 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
Kdm3aQ6PCM1 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
Kdm3aQ6PCM1 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Kdm3aQ6PCM1 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC25.32■■□□□ 1.64
Kdm3aQ6PCM1 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC25.32■■□□□ 1.64
Kdm3aQ6PCM1 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC25.32■■□□□ 1.64
Kdm3aQ6PCM1 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Kdm3aQ6PCM1 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
Kdm3aQ6PCM1 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC25.31■■□□□ 1.64
Kdm3aQ6PCM1 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC25.31■■□□□ 1.64
Kdm3aQ6PCM1 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC25.31■■□□□ 1.64
Kdm3aQ6PCM1 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC25.31■■□□□ 1.64
Kdm3aQ6PCM1 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC25.31■■□□□ 1.64
Kdm3aQ6PCM1 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
Kdm3aQ6PCM1 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC25.3■■□□□ 1.64
Kdm3aQ6PCM1 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC25.3■■□□□ 1.64
Kdm3aQ6PCM1 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC25.3■■□□□ 1.64
Kdm3aQ6PCM1 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
Kdm3aQ6PCM1 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
Kdm3aQ6PCM1 Gm9870-201ENSMUST00000063874 645 ntBASIC25.3■■□□□ 1.64
Kdm3aQ6PCM1 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
Kdm3aQ6PCM1 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Kdm3aQ6PCM1 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC25.29■■□□□ 1.64
Kdm3aQ6PCM1 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
Kdm3aQ6PCM1 Golgb1-201ENSMUST00000023534 498 ntBASIC25.29■■□□□ 1.64
Kdm3aQ6PCM1 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC25.29■■□□□ 1.64
Kdm3aQ6PCM1 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC25.29■■□□□ 1.64
Kdm3aQ6PCM1 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC25.29■■□□□ 1.64
Kdm3aQ6PCM1 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC25.28■■□□□ 1.64
Kdm3aQ6PCM1 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
Kdm3aQ6PCM1 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC25.28■■□□□ 1.64
Kdm3aQ6PCM1 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
Kdm3aQ6PCM1 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
Kdm3aQ6PCM1 Gm43403-201ENSMUST00000198011 1786 ntBASIC25.27■■□□□ 1.64
Kdm3aQ6PCM1 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
Kdm3aQ6PCM1 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC25.27■■□□□ 1.64
Kdm3aQ6PCM1 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
Kdm3aQ6PCM1 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC25.27■■□□□ 1.64
Kdm3aQ6PCM1 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC25.27■■□□□ 1.64
Kdm3aQ6PCM1 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
Kdm3aQ6PCM1 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC25.27■■□□□ 1.64
Kdm3aQ6PCM1 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC25.26■■□□□ 1.64
Kdm3aQ6PCM1 Gm7143-201ENSMUST00000222811 859 ntBASIC25.26■■□□□ 1.63
Kdm3aQ6PCM1 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
Kdm3aQ6PCM1 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC25.26■■□□□ 1.63
Kdm3aQ6PCM1 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
Kdm3aQ6PCM1 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC25.26■■□□□ 1.63
Kdm3aQ6PCM1 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
Kdm3aQ6PCM1 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
Kdm3aQ6PCM1 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
Kdm3aQ6PCM1 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC25.25■■□□□ 1.63
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms