Protein–RNA interactions for Protein: Q6P4T2

Snrnp200, U5 small nuclear ribonucleoprotein 200 kDa helicase, mousemouse

Known RBP Predictions only

Length 2,136 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp200Q6P4T2 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Snrnp200Q6P4T2 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC19.92■□□□□ 0.78
Snrnp200Q6P4T2 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Snrnp200Q6P4T2 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
Snrnp200Q6P4T2 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Snrnp200Q6P4T2 Gm22238-201ENSMUST00000175222 88 ntBASIC19.91■□□□□ 0.78
Snrnp200Q6P4T2 Gm7417-201ENSMUST00000192950 473 ntBASIC19.91■□□□□ 0.78
Snrnp200Q6P4T2 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC19.91■□□□□ 0.78
Snrnp200Q6P4T2 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Snrnp200Q6P4T2 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC19.91■□□□□ 0.78
Snrnp200Q6P4T2 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC19.91■□□□□ 0.78
Snrnp200Q6P4T2 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Snrnp200Q6P4T2 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
Snrnp200Q6P4T2 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Snrnp200Q6P4T2 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Snrnp200Q6P4T2 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Snrnp200Q6P4T2 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC19.9■□□□□ 0.78
Snrnp200Q6P4T2 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC19.9■□□□□ 0.78
Snrnp200Q6P4T2 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Snrnp200Q6P4T2 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Snrnp200Q6P4T2 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
Snrnp200Q6P4T2 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC19.9■□□□□ 0.78
Snrnp200Q6P4T2 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Snrnp200Q6P4T2 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Snrnp200Q6P4T2 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.78
Snrnp200Q6P4T2 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC19.89■□□□□ 0.77
Snrnp200Q6P4T2 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC19.89■□□□□ 0.77
Snrnp200Q6P4T2 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Snrnp200Q6P4T2 Gm32051-202ENSMUST00000197905 2385 ntBASIC19.89■□□□□ 0.77
Snrnp200Q6P4T2 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Snrnp200Q6P4T2 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC19.88■□□□□ 0.77
Snrnp200Q6P4T2 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Snrnp200Q6P4T2 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC19.88■□□□□ 0.77
Snrnp200Q6P4T2 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC19.88■□□□□ 0.77
Snrnp200Q6P4T2 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Snrnp200Q6P4T2 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Snrnp200Q6P4T2 Etf1-202ENSMUST00000180351 108 ntBASIC19.88■□□□□ 0.77
Snrnp200Q6P4T2 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Snrnp200Q6P4T2 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Snrnp200Q6P4T2 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Snrnp200Q6P4T2 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Snrnp200Q6P4T2 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Snrnp200Q6P4T2 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Snrnp200Q6P4T2 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Snrnp200Q6P4T2 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Snrnp200Q6P4T2 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC19.87■□□□□ 0.77
Snrnp200Q6P4T2 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Snrnp200Q6P4T2 Kdm3b-204ENSMUST00000224715 2032 ntBASIC19.86■□□□□ 0.77
Snrnp200Q6P4T2 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Snrnp200Q6P4T2 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC19.86■□□□□ 0.77
Snrnp200Q6P4T2 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Snrnp200Q6P4T2 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC19.86■□□□□ 0.77
Snrnp200Q6P4T2 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Snrnp200Q6P4T2 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Snrnp200Q6P4T2 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
Snrnp200Q6P4T2 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Snrnp200Q6P4T2 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Snrnp200Q6P4T2 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Snrnp200Q6P4T2 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Snrnp200Q6P4T2 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Snrnp200Q6P4T2 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Snrnp200Q6P4T2 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Snrnp200Q6P4T2 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Snrnp200Q6P4T2 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Snrnp200Q6P4T2 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC19.84■□□□□ 0.77
Snrnp200Q6P4T2 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Snrnp200Q6P4T2 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
Snrnp200Q6P4T2 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC19.83■□□□□ 0.77
Snrnp200Q6P4T2 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Snrnp200Q6P4T2 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC19.83■□□□□ 0.77
Snrnp200Q6P4T2 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
Snrnp200Q6P4T2 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC19.83■□□□□ 0.77
Snrnp200Q6P4T2 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC19.83■□□□□ 0.77
Snrnp200Q6P4T2 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Snrnp200Q6P4T2 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Snrnp200Q6P4T2 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Snrnp200Q6P4T2 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Snrnp200Q6P4T2 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC19.82■□□□□ 0.76
Snrnp200Q6P4T2 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Snrnp200Q6P4T2 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC19.82■□□□□ 0.76
Snrnp200Q6P4T2 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Snrnp200Q6P4T2 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Snrnp200Q6P4T2 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
Snrnp200Q6P4T2 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Snrnp200Q6P4T2 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
Snrnp200Q6P4T2 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
Snrnp200Q6P4T2 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC19.81■□□□□ 0.76
Snrnp200Q6P4T2 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Snrnp200Q6P4T2 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Snrnp200Q6P4T2 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Snrnp200Q6P4T2 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Snrnp200Q6P4T2 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Snrnp200Q6P4T2 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Snrnp200Q6P4T2 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Snrnp200Q6P4T2 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Snrnp200Q6P4T2 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC19.8■□□□□ 0.76
Snrnp200Q6P4T2 Gm12922-201ENSMUST00000120626 809 ntBASIC19.8■□□□□ 0.76
Snrnp200Q6P4T2 Gm21956-201ENSMUST00000179946 522 ntBASIC19.8■□□□□ 0.76
Snrnp200Q6P4T2 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Snrnp200Q6P4T2 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 139.3 ms