Protein–RNA interactions for Protein: Q62059

Vcan, Versican core protein, mousemouse

Predictions only

Length 3,357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcanQ62059 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
VcanQ62059 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
VcanQ62059 Gm12251-201ENSMUST00000117893 792 ntBASIC20.11■□□□□ 0.81
VcanQ62059 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC20.11■□□□□ 0.81
VcanQ62059 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC20.11■□□□□ 0.81
VcanQ62059 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC20.11■□□□□ 0.81
VcanQ62059 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
VcanQ62059 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
VcanQ62059 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
VcanQ62059 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC20.1■□□□□ 0.81
VcanQ62059 Gm44949-201ENSMUST00000206423 1450 ntBASIC20.1■□□□□ 0.81
VcanQ62059 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
VcanQ62059 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC20.09■□□□□ 0.81
VcanQ62059 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
VcanQ62059 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
VcanQ62059 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
VcanQ62059 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
VcanQ62059 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
VcanQ62059 Mir7071-201ENSMUST00000184847 69 ntBASIC20.09■□□□□ 0.81
VcanQ62059 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
VcanQ62059 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
VcanQ62059 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
VcanQ62059 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
VcanQ62059 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
VcanQ62059 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
VcanQ62059 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC20.07■□□□□ 0.8
VcanQ62059 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
VcanQ62059 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
VcanQ62059 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
VcanQ62059 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
VcanQ62059 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
VcanQ62059 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
VcanQ62059 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC20.06■□□□□ 0.8
VcanQ62059 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC20.06■□□□□ 0.8
VcanQ62059 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
VcanQ62059 Gm7977-201ENSMUST00000193787 748 ntBASIC20.06■□□□□ 0.8
VcanQ62059 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
VcanQ62059 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
VcanQ62059 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
VcanQ62059 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC20.06■□□□□ 0.8
VcanQ62059 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
VcanQ62059 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
VcanQ62059 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
VcanQ62059 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC20.05■□□□□ 0.8
VcanQ62059 Gm43060-201ENSMUST00000200621 289 ntBASIC20.04■□□□□ 0.8
VcanQ62059 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
VcanQ62059 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
VcanQ62059 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
VcanQ62059 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
VcanQ62059 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
VcanQ62059 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
VcanQ62059 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC20.03■□□□□ 0.8
VcanQ62059 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC20.03■□□□□ 0.8
VcanQ62059 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
VcanQ62059 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
VcanQ62059 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
VcanQ62059 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
VcanQ62059 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
VcanQ62059 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
VcanQ62059 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
VcanQ62059 AC158538.1-201ENSMUST00000225870 294 ntBASIC20.02■□□□□ 0.8
VcanQ62059 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
VcanQ62059 Gm10033-202ENSMUST00000211874 928 ntBASIC20.01■□□□□ 0.79
VcanQ62059 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC20.01■□□□□ 0.79
VcanQ62059 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
VcanQ62059 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
VcanQ62059 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC20.01■□□□□ 0.79
VcanQ62059 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC20.01■□□□□ 0.79
VcanQ62059 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
VcanQ62059 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
VcanQ62059 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
VcanQ62059 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
VcanQ62059 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC20■□□□□ 0.79
VcanQ62059 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC20■□□□□ 0.79
VcanQ62059 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC20■□□□□ 0.79
VcanQ62059 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
VcanQ62059 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC20■□□□□ 0.79
VcanQ62059 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
VcanQ62059 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
VcanQ62059 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC20■□□□□ 0.79
VcanQ62059 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC20■□□□□ 0.79
VcanQ62059 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
VcanQ62059 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC19.99■□□□□ 0.79
VcanQ62059 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
VcanQ62059 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
VcanQ62059 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC19.99■□□□□ 0.79
VcanQ62059 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC19.99■□□□□ 0.79
VcanQ62059 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
VcanQ62059 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
VcanQ62059 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
VcanQ62059 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
VcanQ62059 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
VcanQ62059 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
VcanQ62059 AC117245.4-201ENSMUST00000217388 1646 ntBASIC19.98■□□□□ 0.79
VcanQ62059 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
VcanQ62059 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
VcanQ62059 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
VcanQ62059 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
VcanQ62059 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
VcanQ62059 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 148.2 ms