Protein–RNA interactions for Protein: Q5M6W3

Clhc1, Clathrin heavy chain linker domain-containing protein 1, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clhc1Q5M6W3 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
Clhc1Q5M6W3 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Clhc1Q5M6W3 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Clhc1Q5M6W3 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Clhc1Q5M6W3 Gm8093-201ENSMUST00000128935 1892 ntBASIC20.06■□□□□ 0.8
Clhc1Q5M6W3 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Clhc1Q5M6W3 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Clhc1Q5M6W3 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Clhc1Q5M6W3 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Clhc1Q5M6W3 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Clhc1Q5M6W3 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC20.06■□□□□ 0.8
Clhc1Q5M6W3 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC20.06■□□□□ 0.8
Clhc1Q5M6W3 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Clhc1Q5M6W3 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Clhc1Q5M6W3 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Clhc1Q5M6W3 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Clhc1Q5M6W3 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Clhc1Q5M6W3 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Clhc1Q5M6W3 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Clhc1Q5M6W3 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Clhc1Q5M6W3 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC20.04■□□□□ 0.8
Clhc1Q5M6W3 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Clhc1Q5M6W3 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Clhc1Q5M6W3 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC20.04■□□□□ 0.8
Clhc1Q5M6W3 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Clhc1Q5M6W3 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Clhc1Q5M6W3 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Clhc1Q5M6W3 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Clhc1Q5M6W3 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
Clhc1Q5M6W3 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Clhc1Q5M6W3 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Clhc1Q5M6W3 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
Clhc1Q5M6W3 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC20.03■□□□□ 0.8
Clhc1Q5M6W3 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
Clhc1Q5M6W3 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC20.03■□□□□ 0.8
Clhc1Q5M6W3 Gm7199-201ENSMUST00000118327 1485 ntBASIC20.03■□□□□ 0.8
Clhc1Q5M6W3 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
Clhc1Q5M6W3 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Clhc1Q5M6W3 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Clhc1Q5M6W3 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Clhc1Q5M6W3 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Clhc1Q5M6W3 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Clhc1Q5M6W3 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC20.02■□□□□ 0.8
Clhc1Q5M6W3 Kdm3b-204ENSMUST00000224715 2032 ntBASIC20.02■□□□□ 0.8
Clhc1Q5M6W3 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Clhc1Q5M6W3 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Clhc1Q5M6W3 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC20.02■□□□□ 0.8
Clhc1Q5M6W3 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Clhc1Q5M6W3 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Clhc1Q5M6W3 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Clhc1Q5M6W3 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC20.02■□□□□ 0.8
Clhc1Q5M6W3 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
Clhc1Q5M6W3 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
Clhc1Q5M6W3 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.79
Clhc1Q5M6W3 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.79
Clhc1Q5M6W3 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.79
Clhc1Q5M6W3 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC20.01■□□□□ 0.79
Clhc1Q5M6W3 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
Clhc1Q5M6W3 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Clhc1Q5M6W3 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC20.01■□□□□ 0.79
Clhc1Q5M6W3 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Clhc1Q5M6W3 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Clhc1Q5M6W3 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Clhc1Q5M6W3 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Clhc1Q5M6W3 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC20■□□□□ 0.79
Clhc1Q5M6W3 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Clhc1Q5M6W3 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC20■□□□□ 0.79
Clhc1Q5M6W3 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC20■□□□□ 0.79
Clhc1Q5M6W3 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
Clhc1Q5M6W3 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Clhc1Q5M6W3 Gm27502-201ENSMUST00000183495 199 ntBASIC19.99■□□□□ 0.79
Clhc1Q5M6W3 AC151971.4-201ENSMUST00000214717 704 ntBASIC19.99■□□□□ 0.79
Clhc1Q5M6W3 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Clhc1Q5M6W3 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC19.98■□□□□ 0.79
Clhc1Q5M6W3 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Clhc1Q5M6W3 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Clhc1Q5M6W3 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC19.98■□□□□ 0.79
Clhc1Q5M6W3 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Clhc1Q5M6W3 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
Clhc1Q5M6W3 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Clhc1Q5M6W3 AC117769.4-201ENSMUST00000225679 685 ntBASIC19.97■□□□□ 0.79
Clhc1Q5M6W3 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Clhc1Q5M6W3 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Clhc1Q5M6W3 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Clhc1Q5M6W3 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Clhc1Q5M6W3 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Clhc1Q5M6W3 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
Clhc1Q5M6W3 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Clhc1Q5M6W3 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC19.95■□□□□ 0.78
Clhc1Q5M6W3 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Clhc1Q5M6W3 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Clhc1Q5M6W3 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Clhc1Q5M6W3 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
Clhc1Q5M6W3 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC19.94■□□□□ 0.78
Clhc1Q5M6W3 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Clhc1Q5M6W3 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Clhc1Q5M6W3 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Clhc1Q5M6W3 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Clhc1Q5M6W3 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Clhc1Q5M6W3 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 69.6 ms