Protein–RNA interactions for Protein: Q3U2C5

Rnf149, E3 ubiquitin-protein ligase RNF149, mousemouse

Predictions only

Length 394 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf149Q3U2C5 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Rnf149Q3U2C5 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rnf149Q3U2C5 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rnf149Q3U2C5 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Rnf149Q3U2C5 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Rnf149Q3U2C5 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rnf149Q3U2C5 Gm43403-201ENSMUST00000198011 1786 ntBASIC18.66■□□□□ 0.58
Rnf149Q3U2C5 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rnf149Q3U2C5 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rnf149Q3U2C5 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC18.66■□□□□ 0.58
Rnf149Q3U2C5 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC18.66■□□□□ 0.58
Rnf149Q3U2C5 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rnf149Q3U2C5 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rnf149Q3U2C5 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rnf149Q3U2C5 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Rnf149Q3U2C5 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rnf149Q3U2C5 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Rnf149Q3U2C5 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rnf149Q3U2C5 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rnf149Q3U2C5 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Rnf149Q3U2C5 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rnf149Q3U2C5 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC18.65■□□□□ 0.58
Rnf149Q3U2C5 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rnf149Q3U2C5 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC18.65■□□□□ 0.58
Rnf149Q3U2C5 AC117769.4-201ENSMUST00000225679 685 ntBASIC18.65■□□□□ 0.58
Rnf149Q3U2C5 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rnf149Q3U2C5 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rnf149Q3U2C5 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rnf149Q3U2C5 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rnf149Q3U2C5 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Rnf149Q3U2C5 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rnf149Q3U2C5 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC18.64■□□□□ 0.57
Rnf149Q3U2C5 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Rnf149Q3U2C5 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rnf149Q3U2C5 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rnf149Q3U2C5 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rnf149Q3U2C5 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rnf149Q3U2C5 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Rnf149Q3U2C5 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Rnf149Q3U2C5 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rnf149Q3U2C5 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC18.63■□□□□ 0.57
Rnf149Q3U2C5 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Rnf149Q3U2C5 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Rnf149Q3U2C5 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rnf149Q3U2C5 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rnf149Q3U2C5 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rnf149Q3U2C5 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rnf149Q3U2C5 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Rnf149Q3U2C5 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rnf149Q3U2C5 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Rnf149Q3U2C5 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rnf149Q3U2C5 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Rnf149Q3U2C5 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Rnf149Q3U2C5 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rnf149Q3U2C5 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Rnf149Q3U2C5 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rnf149Q3U2C5 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rnf149Q3U2C5 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rnf149Q3U2C5 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rnf149Q3U2C5 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Rnf149Q3U2C5 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rnf149Q3U2C5 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Rnf149Q3U2C5 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Rnf149Q3U2C5 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Rnf149Q3U2C5 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rnf149Q3U2C5 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC18.6■□□□□ 0.57
Rnf149Q3U2C5 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rnf149Q3U2C5 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Rnf149Q3U2C5 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rnf149Q3U2C5 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rnf149Q3U2C5 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
Rnf149Q3U2C5 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Rnf149Q3U2C5 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Rnf149Q3U2C5 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rnf149Q3U2C5 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Rnf149Q3U2C5 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rnf149Q3U2C5 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC18.59■□□□□ 0.57
Rnf149Q3U2C5 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rnf149Q3U2C5 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Rnf149Q3U2C5 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Rnf149Q3U2C5 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
Rnf149Q3U2C5 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Rnf149Q3U2C5 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC18.58■□□□□ 0.56
Rnf149Q3U2C5 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC18.58■□□□□ 0.56
Rnf149Q3U2C5 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Rnf149Q3U2C5 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rnf149Q3U2C5 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rnf149Q3U2C5 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rnf149Q3U2C5 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rnf149Q3U2C5 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Rnf149Q3U2C5 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Rnf149Q3U2C5 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC18.57■□□□□ 0.56
Rnf149Q3U2C5 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rnf149Q3U2C5 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rnf149Q3U2C5 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
Rnf149Q3U2C5 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Rnf149Q3U2C5 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Rnf149Q3U2C5 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Rnf149Q3U2C5 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rnf149Q3U2C5 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 14.5 ms