Protein–RNA interactions for Protein: Q3TR08

Fndc4, Fibronectin type III domain-containing protein 4, mousemouse

Predictions only

Length 231 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fndc4Q3TR08 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Fndc4Q3TR08 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC17.69■□□□□ 0.42
Fndc4Q3TR08 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Fndc4Q3TR08 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Fndc4Q3TR08 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC17.69■□□□□ 0.42
Fndc4Q3TR08 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Fndc4Q3TR08 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Fndc4Q3TR08 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Fndc4Q3TR08 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Fndc4Q3TR08 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Fndc4Q3TR08 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Fndc4Q3TR08 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Fndc4Q3TR08 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
Fndc4Q3TR08 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Fndc4Q3TR08 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Fndc4Q3TR08 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Fndc4Q3TR08 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Fndc4Q3TR08 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Fndc4Q3TR08 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC17.68■□□□□ 0.42
Fndc4Q3TR08 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC17.68■□□□□ 0.42
Fndc4Q3TR08 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Fndc4Q3TR08 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Fndc4Q3TR08 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Fndc4Q3TR08 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Fndc4Q3TR08 Gm15043-201ENSMUST00000118843 1543 ntBASIC17.67■□□□□ 0.42
Fndc4Q3TR08 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Fndc4Q3TR08 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Fndc4Q3TR08 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Fndc4Q3TR08 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Fndc4Q3TR08 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC17.67■□□□□ 0.42
Fndc4Q3TR08 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Fndc4Q3TR08 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Fndc4Q3TR08 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC17.67■□□□□ 0.42
Fndc4Q3TR08 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Fndc4Q3TR08 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Fndc4Q3TR08 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Fndc4Q3TR08 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Fndc4Q3TR08 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Fndc4Q3TR08 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC17.66■□□□□ 0.42
Fndc4Q3TR08 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Fndc4Q3TR08 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Fndc4Q3TR08 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Fndc4Q3TR08 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Fndc4Q3TR08 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Fndc4Q3TR08 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Fndc4Q3TR08 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Fndc4Q3TR08 Cap2-205ENSMUST00000225824 1634 ntBASIC17.65■□□□□ 0.42
Fndc4Q3TR08 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC17.65■□□□□ 0.42
Fndc4Q3TR08 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Fndc4Q3TR08 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Fndc4Q3TR08 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC17.65■□□□□ 0.42
Fndc4Q3TR08 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Fndc4Q3TR08 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Fndc4Q3TR08 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Fndc4Q3TR08 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Fndc4Q3TR08 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC17.64■□□□□ 0.41
Fndc4Q3TR08 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Fndc4Q3TR08 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Fndc4Q3TR08 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Fndc4Q3TR08 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Fndc4Q3TR08 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Fndc4Q3TR08 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Fndc4Q3TR08 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC17.64■□□□□ 0.41
Fndc4Q3TR08 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Fndc4Q3TR08 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Fndc4Q3TR08 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Fndc4Q3TR08 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Fndc4Q3TR08 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC17.63■□□□□ 0.41
Fndc4Q3TR08 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Fndc4Q3TR08 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC17.63■□□□□ 0.41
Fndc4Q3TR08 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Fndc4Q3TR08 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
Fndc4Q3TR08 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Fndc4Q3TR08 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
Fndc4Q3TR08 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Fndc4Q3TR08 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Fndc4Q3TR08 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Fndc4Q3TR08 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Fndc4Q3TR08 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Fndc4Q3TR08 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Fndc4Q3TR08 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Fndc4Q3TR08 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Fndc4Q3TR08 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Fndc4Q3TR08 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Fndc4Q3TR08 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Fndc4Q3TR08 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Fndc4Q3TR08 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Fndc4Q3TR08 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Fndc4Q3TR08 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
Fndc4Q3TR08 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Fndc4Q3TR08 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Fndc4Q3TR08 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Fndc4Q3TR08 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC17.61■□□□□ 0.41
Fndc4Q3TR08 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Fndc4Q3TR08 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Fndc4Q3TR08 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Fndc4Q3TR08 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Fndc4Q3TR08 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Fndc4Q3TR08 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Fndc4Q3TR08 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 75.6 ms