Protein–RNA interactions for Protein: P55288

Cdh11, Cadherin-11, mousemouse

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh11P55288 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Cdh11P55288 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cdh11P55288 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Cdh11P55288 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC18.92■□□□□ 0.62
Cdh11P55288 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC18.92■□□□□ 0.62
Cdh11P55288 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cdh11P55288 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cdh11P55288 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cdh11P55288 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cdh11P55288 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC18.91■□□□□ 0.62
Cdh11P55288 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Cdh11P55288 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cdh11P55288 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cdh11P55288 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC18.91■□□□□ 0.62
Cdh11P55288 Nsd1-203ENSMUST00000224156 1149 ntBASIC18.91■□□□□ 0.62
Cdh11P55288 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Cdh11P55288 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Cdh11P55288 AC117245.4-201ENSMUST00000217388 1646 ntBASIC18.91■□□□□ 0.62
Cdh11P55288 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Cdh11P55288 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cdh11P55288 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cdh11P55288 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Cdh11P55288 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Cdh11P55288 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC18.9■□□□□ 0.62
Cdh11P55288 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cdh11P55288 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
Cdh11P55288 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Cdh11P55288 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC18.89■□□□□ 0.62
Cdh11P55288 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC18.89■□□□□ 0.61
Cdh11P55288 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC18.89■□□□□ 0.61
Cdh11P55288 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cdh11P55288 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cdh11P55288 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Cdh11P55288 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Cdh11P55288 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cdh11P55288 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cdh11P55288 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cdh11P55288 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cdh11P55288 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC18.88■□□□□ 0.61
Cdh11P55288 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cdh11P55288 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cdh11P55288 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cdh11P55288 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC18.87■□□□□ 0.61
Cdh11P55288 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Cdh11P55288 Gm15546-201ENSMUST00000122095 826 ntBASIC18.87■□□□□ 0.61
Cdh11P55288 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC18.87■□□□□ 0.61
Cdh11P55288 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cdh11P55288 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC18.87■□□□□ 0.61
Cdh11P55288 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cdh11P55288 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
Cdh11P55288 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Cdh11P55288 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC18.86■□□□□ 0.61
Cdh11P55288 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Cdh11P55288 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Cdh11P55288 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cdh11P55288 Gm45444-201ENSMUST00000211394 898 ntBASIC18.86■□□□□ 0.61
Cdh11P55288 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC18.86■□□□□ 0.61
Cdh11P55288 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cdh11P55288 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cdh11P55288 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cdh11P55288 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cdh11P55288 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cdh11P55288 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cdh11P55288 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Cdh11P55288 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cdh11P55288 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cdh11P55288 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Cdh11P55288 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Cdh11P55288 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC18.85■□□□□ 0.61
Cdh11P55288 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cdh11P55288 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cdh11P55288 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Cdh11P55288 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cdh11P55288 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cdh11P55288 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Cdh11P55288 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Cdh11P55288 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cdh11P55288 Gm43566-201ENSMUST00000196851 808 ntBASIC18.84■□□□□ 0.61
Cdh11P55288 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cdh11P55288 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cdh11P55288 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Cdh11P55288 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC18.84■□□□□ 0.61
Cdh11P55288 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cdh11P55288 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Cdh11P55288 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cdh11P55288 Gm5522-201ENSMUST00000189483 1242 ntBASIC18.83■□□□□ 0.6
Cdh11P55288 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cdh11P55288 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cdh11P55288 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Cdh11P55288 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cdh11P55288 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
Cdh11P55288 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cdh11P55288 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cdh11P55288 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cdh11P55288 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Cdh11P55288 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cdh11P55288 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cdh11P55288 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC18.82■□□□□ 0.6
Cdh11P55288 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cdh11P55288 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 70.4 ms