Protein–RNA interactions for Protein: P04944

Ig kappa chain V-VI region NQ5-78.2.6, mousemouse

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04944 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
P04944 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC16.28■□□□□ 0.2
P04944 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
P04944 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
P04944 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
P04944 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
P04944 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
P04944 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
P04944 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC16.27■□□□□ 0.2
P04944 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC16.27■□□□□ 0.2
P04944 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC16.27■□□□□ 0.2
P04944 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
P04944 Gm20634-201ENSMUST00000090779 2956 ntBASIC16.27■□□□□ 0.19
P04944 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
P04944 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
P04944 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
P04944 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
P04944 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
P04944 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
P04944 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
P04944 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
P04944 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
P04944 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC16.26■□□□□ 0.19
P04944 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
P04944 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
P04944 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
P04944 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
P04944 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
P04944 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
P04944 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
P04944 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
P04944 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
P04944 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
P04944 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
P04944 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
P04944 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
P04944 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
P04944 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
P04944 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
P04944 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
P04944 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
P04944 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
P04944 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC16.23■□□□□ 0.19
P04944 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
P04944 Gm8093-201ENSMUST00000128935 1892 ntBASIC16.23■□□□□ 0.19
P04944 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
P04944 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
P04944 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
P04944 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC16.23■□□□□ 0.19
P04944 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
P04944 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
P04944 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
P04944 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
P04944 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
P04944 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
P04944 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
P04944 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
P04944 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
P04944 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
P04944 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
P04944 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
P04944 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
P04944 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
P04944 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
P04944 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
P04944 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
P04944 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
P04944 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC16.22■□□□□ 0.19
P04944 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
P04944 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
P04944 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
P04944 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
P04944 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
P04944 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
P04944 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
P04944 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
P04944 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
P04944 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
P04944 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
P04944 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
P04944 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC16.21■□□□□ 0.19
P04944 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
P04944 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
P04944 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
P04944 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
P04944 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC16.2■□□□□ 0.18
P04944 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
P04944 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC16.2■□□□□ 0.18
P04944 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC16.2■□□□□ 0.18
P04944 Hsf1-207ENSMUST00000228371 2102 ntBASIC16.2■□□□□ 0.18
P04944 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
P04944 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
P04944 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC16.2■□□□□ 0.18
P04944 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
P04944 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
P04944 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
P04944 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC16.19■□□□□ 0.18
P04944 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
P04944 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
P04944 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 18 ms