Protein–RNA interactions for Protein: O08983

Hps1, Hermansky-Pudlak syndrome 1 protein homolog, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hps1O08983 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Hps1O08983 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Hps1O08983 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Hps1O08983 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Hps1O08983 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Hps1O08983 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Hps1O08983 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Hps1O08983 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Hps1O08983 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Hps1O08983 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Hps1O08983 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Hps1O08983 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Hps1O08983 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Hps1O08983 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Hps1O08983 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC19.14■□□□□ 0.66
Hps1O08983 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Hps1O08983 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Hps1O08983 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Hps1O08983 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Hps1O08983 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Hps1O08983 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC19.14■□□□□ 0.65
Hps1O08983 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Hps1O08983 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Hps1O08983 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Hps1O08983 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Hps1O08983 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Hps1O08983 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Hps1O08983 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Hps1O08983 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Hps1O08983 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Hps1O08983 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Hps1O08983 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Hps1O08983 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Hps1O08983 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Hps1O08983 Gm32051-202ENSMUST00000197905 2385 ntBASIC19.13■□□□□ 0.65
Hps1O08983 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Hps1O08983 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Hps1O08983 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Hps1O08983 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Hps1O08983 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Hps1O08983 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Hps1O08983 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Hps1O08983 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC19.12■□□□□ 0.65
Hps1O08983 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Hps1O08983 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
Hps1O08983 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Hps1O08983 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC19.11■□□□□ 0.65
Hps1O08983 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Hps1O08983 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Hps1O08983 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Hps1O08983 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC19.11■□□□□ 0.65
Hps1O08983 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Hps1O08983 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC19.11■□□□□ 0.65
Hps1O08983 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Hps1O08983 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Hps1O08983 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Hps1O08983 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Hps1O08983 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC19.1■□□□□ 0.65
Hps1O08983 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC19.1■□□□□ 0.65
Hps1O08983 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
Hps1O08983 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Hps1O08983 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Hps1O08983 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Hps1O08983 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Hps1O08983 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Hps1O08983 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC19.09■□□□□ 0.65
Hps1O08983 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Hps1O08983 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC19.09■□□□□ 0.65
Hps1O08983 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Hps1O08983 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC19.09■□□□□ 0.65
Hps1O08983 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Hps1O08983 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Hps1O08983 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Hps1O08983 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Hps1O08983 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Hps1O08983 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Hps1O08983 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Hps1O08983 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC19.08■□□□□ 0.64
Hps1O08983 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC19.08■□□□□ 0.64
Hps1O08983 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Hps1O08983 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC19.08■□□□□ 0.64
Hps1O08983 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
Hps1O08983 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Hps1O08983 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Hps1O08983 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
Hps1O08983 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Hps1O08983 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Hps1O08983 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Hps1O08983 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
Hps1O08983 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Hps1O08983 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
Hps1O08983 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Hps1O08983 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Hps1O08983 AC117245.4-201ENSMUST00000217388 1646 ntBASIC19.06■□□□□ 0.64
Hps1O08983 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Hps1O08983 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Hps1O08983 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Hps1O08983 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Hps1O08983 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC19.06■□□□□ 0.64
Hps1O08983 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 156.1 ms