Protein–RNA interactions for Protein: F2Z3U3

Raph1, Ras association (RalGDS/AF-6) and pleckstrin homology domains 1, mousemouse

Predictions only

Length 1,266 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raph1F2Z3U3 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Raph1F2Z3U3 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Raph1F2Z3U3 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Raph1F2Z3U3 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Raph1F2Z3U3 Snhg20-203ENSMUST00000182811 2153 ntBASIC20.66■□□□□ 0.9
Raph1F2Z3U3 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Raph1F2Z3U3 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC20.66■□□□□ 0.9
Raph1F2Z3U3 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Raph1F2Z3U3 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Raph1F2Z3U3 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Raph1F2Z3U3 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Raph1F2Z3U3 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Raph1F2Z3U3 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Raph1F2Z3U3 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Raph1F2Z3U3 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Raph1F2Z3U3 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Raph1F2Z3U3 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
Raph1F2Z3U3 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Raph1F2Z3U3 Gm44428-201ENSMUST00000204474 874 ntBASIC20.65■□□□□ 0.9
Raph1F2Z3U3 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Raph1F2Z3U3 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Raph1F2Z3U3 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.9
Raph1F2Z3U3 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Raph1F2Z3U3 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Raph1F2Z3U3 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC20.64■□□□□ 0.89
Raph1F2Z3U3 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC20.64■□□□□ 0.89
Raph1F2Z3U3 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Raph1F2Z3U3 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
Raph1F2Z3U3 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Raph1F2Z3U3 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Raph1F2Z3U3 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC20.63■□□□□ 0.89
Raph1F2Z3U3 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Raph1F2Z3U3 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC20.62■□□□□ 0.89
Raph1F2Z3U3 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Raph1F2Z3U3 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Raph1F2Z3U3 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Raph1F2Z3U3 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Raph1F2Z3U3 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Raph1F2Z3U3 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Raph1F2Z3U3 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Raph1F2Z3U3 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Raph1F2Z3U3 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Raph1F2Z3U3 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Raph1F2Z3U3 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Raph1F2Z3U3 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Raph1F2Z3U3 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Raph1F2Z3U3 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Raph1F2Z3U3 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Raph1F2Z3U3 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Raph1F2Z3U3 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC20.6■□□□□ 0.89
Raph1F2Z3U3 Iqck-206ENSMUST00000208658 2891 ntBASIC20.6■□□□□ 0.89
Raph1F2Z3U3 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Raph1F2Z3U3 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Raph1F2Z3U3 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Raph1F2Z3U3 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Raph1F2Z3U3 Gm34220-201ENSMUST00000223001 2709 ntBASIC20.6■□□□□ 0.89
Raph1F2Z3U3 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Raph1F2Z3U3 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Raph1F2Z3U3 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Raph1F2Z3U3 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Raph1F2Z3U3 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Raph1F2Z3U3 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Raph1F2Z3U3 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Raph1F2Z3U3 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Raph1F2Z3U3 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Raph1F2Z3U3 AC117769.4-201ENSMUST00000225679 685 ntBASIC20.59■□□□□ 0.89
Raph1F2Z3U3 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Raph1F2Z3U3 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Raph1F2Z3U3 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Raph1F2Z3U3 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Raph1F2Z3U3 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Raph1F2Z3U3 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Raph1F2Z3U3 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
Raph1F2Z3U3 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Raph1F2Z3U3 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Raph1F2Z3U3 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
Raph1F2Z3U3 Gm11175-201ENSMUST00000116172 543 ntBASIC20.58■□□□□ 0.89
Raph1F2Z3U3 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC20.58■□□□□ 0.89
Raph1F2Z3U3 Mir6538-201ENSMUST00000183713 110 ntBASIC20.58■□□□□ 0.89
Raph1F2Z3U3 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Raph1F2Z3U3 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Raph1F2Z3U3 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Raph1F2Z3U3 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Raph1F2Z3U3 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Raph1F2Z3U3 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Raph1F2Z3U3 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Raph1F2Z3U3 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Raph1F2Z3U3 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Raph1F2Z3U3 AC164883.3-201ENSMUST00000227396 1774 ntBASIC20.57■□□□□ 0.88
Raph1F2Z3U3 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC20.56■□□□□ 0.88
Raph1F2Z3U3 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Raph1F2Z3U3 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Raph1F2Z3U3 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Raph1F2Z3U3 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Raph1F2Z3U3 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Raph1F2Z3U3 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC20.56■□□□□ 0.88
Raph1F2Z3U3 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Raph1F2Z3U3 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Raph1F2Z3U3 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Raph1F2Z3U3 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 76.5 ms