Protein–RNA interactions for Protein: E9PUB3

Gm5878, Predicted gene 5878, mousemouse

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm5878E9PUB3 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Gm5878E9PUB3 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Gm5878E9PUB3 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Gm5878E9PUB3 Mir6538-201ENSMUST00000183713 110 ntBASIC15.71■□□□□ 0.11
Gm5878E9PUB3 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC15.71■□□□□ 0.11
Gm5878E9PUB3 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Gm5878E9PUB3 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC15.71■□□□□ 0.11
Gm5878E9PUB3 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Gm5878E9PUB3 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Gm5878E9PUB3 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Gm5878E9PUB3 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Gm5878E9PUB3 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Gm5878E9PUB3 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Gm5878E9PUB3 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Gm5878E9PUB3 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Gm5878E9PUB3 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Gm5878E9PUB3 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Gm5878E9PUB3 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Gm5878E9PUB3 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Gm5878E9PUB3 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Gm5878E9PUB3 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Gm5878E9PUB3 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Gm5878E9PUB3 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Gm5878E9PUB3 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Gm5878E9PUB3 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Gm5878E9PUB3 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Gm5878E9PUB3 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Gm5878E9PUB3 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Gm5878E9PUB3 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Gm5878E9PUB3 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Gm5878E9PUB3 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Gm5878E9PUB3 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Gm5878E9PUB3 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Gm5878E9PUB3 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Gm5878E9PUB3 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Gm5878E9PUB3 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Gm5878E9PUB3 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Gm5878E9PUB3 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Gm5878E9PUB3 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC15.68■□□□□ 0.1
Gm5878E9PUB3 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC15.68■□□□□ 0.1
Gm5878E9PUB3 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Gm5878E9PUB3 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Gm5878E9PUB3 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Gm5878E9PUB3 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Gm5878E9PUB3 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Gm5878E9PUB3 Gm11847-201ENSMUST00000125165 1119 ntBASIC15.67■□□□□ 0.1
Gm5878E9PUB3 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Gm5878E9PUB3 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC15.67■□□□□ 0.1
Gm5878E9PUB3 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Gm5878E9PUB3 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Gm5878E9PUB3 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Gm5878E9PUB3 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Gm5878E9PUB3 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Gm5878E9PUB3 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Gm5878E9PUB3 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Gm5878E9PUB3 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Gm5878E9PUB3 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Gm5878E9PUB3 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Gm5878E9PUB3 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Gm5878E9PUB3 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Gm5878E9PUB3 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Gm5878E9PUB3 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Gm5878E9PUB3 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Gm5878E9PUB3 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Gm5878E9PUB3 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Gm5878E9PUB3 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
Gm5878E9PUB3 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC15.65■□□□□ 0.1
Gm5878E9PUB3 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC15.65■□□□□ 0.1
Gm5878E9PUB3 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC15.65■□□□□ 0.1
Gm5878E9PUB3 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC15.65■□□□□ 0.1
Gm5878E9PUB3 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Gm5878E9PUB3 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Gm5878E9PUB3 Gm28536-201ENSMUST00000190971 1317 ntBASIC15.65■□□□□ 0.1
Gm5878E9PUB3 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Gm5878E9PUB3 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Gm5878E9PUB3 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Gm5878E9PUB3 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Gm5878E9PUB3 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC15.64■□□□□ 0.09
Gm5878E9PUB3 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Gm5878E9PUB3 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Gm5878E9PUB3 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Gm5878E9PUB3 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Gm5878E9PUB3 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Gm5878E9PUB3 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Gm5878E9PUB3 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Gm5878E9PUB3 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Gm5878E9PUB3 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC15.64■□□□□ 0.09
Gm5878E9PUB3 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Gm5878E9PUB3 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Gm5878E9PUB3 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Gm5878E9PUB3 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Gm5878E9PUB3 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Gm5878E9PUB3 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Gm5878E9PUB3 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Gm5878E9PUB3 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Gm5878E9PUB3 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC15.63■□□□□ 0.09
Gm5878E9PUB3 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
Gm5878E9PUB3 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Gm5878E9PUB3 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Gm5878E9PUB3 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms