Protein–RNA interactions for Protein: A2A259

Pkd2l1, Polycystic kidney disease 2-like 1 protein, mousemouse

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pkd2l1A2A259 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Pkd2l1A2A259 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Pkd2l1A2A259 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Pkd2l1A2A259 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Pkd2l1A2A259 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC20.3■□□□□ 0.84
Pkd2l1A2A259 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Pkd2l1A2A259 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Pkd2l1A2A259 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Pkd2l1A2A259 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pkd2l1A2A259 AC153524.1-201ENSMUST00000220436 1935 ntBASIC20.29■□□□□ 0.84
Pkd2l1A2A259 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pkd2l1A2A259 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pkd2l1A2A259 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pkd2l1A2A259 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Pkd2l1A2A259 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Pkd2l1A2A259 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Pkd2l1A2A259 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pkd2l1A2A259 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC20.29■□□□□ 0.84
Pkd2l1A2A259 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Pkd2l1A2A259 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC20.28■□□□□ 0.84
Pkd2l1A2A259 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC20.28■□□□□ 0.84
Pkd2l1A2A259 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Pkd2l1A2A259 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Pkd2l1A2A259 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Pkd2l1A2A259 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Pkd2l1A2A259 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC20.28■□□□□ 0.84
Pkd2l1A2A259 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Pkd2l1A2A259 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Pkd2l1A2A259 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Pkd2l1A2A259 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Pkd2l1A2A259 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Pkd2l1A2A259 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC20.27■□□□□ 0.84
Pkd2l1A2A259 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Pkd2l1A2A259 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Pkd2l1A2A259 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Pkd2l1A2A259 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Pkd2l1A2A259 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Pkd2l1A2A259 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Pkd2l1A2A259 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Pkd2l1A2A259 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC20.26■□□□□ 0.83
Pkd2l1A2A259 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC20.26■□□□□ 0.83
Pkd2l1A2A259 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Pkd2l1A2A259 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pkd2l1A2A259 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Pkd2l1A2A259 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pkd2l1A2A259 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pkd2l1A2A259 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pkd2l1A2A259 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pkd2l1A2A259 Gm12504-201ENSMUST00000120860 2231 ntBASIC20.25■□□□□ 0.83
Pkd2l1A2A259 Gm16464-201ENSMUST00000117815 1095 ntBASIC20.25■□□□□ 0.83
Pkd2l1A2A259 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Pkd2l1A2A259 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pkd2l1A2A259 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Pkd2l1A2A259 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pkd2l1A2A259 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pkd2l1A2A259 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pkd2l1A2A259 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC20.24■□□□□ 0.83
Pkd2l1A2A259 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC20.24■□□□□ 0.83
Pkd2l1A2A259 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC20.24■□□□□ 0.83
Pkd2l1A2A259 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Pkd2l1A2A259 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC20.24■□□□□ 0.83
Pkd2l1A2A259 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pkd2l1A2A259 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Pkd2l1A2A259 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pkd2l1A2A259 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Pkd2l1A2A259 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pkd2l1A2A259 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pkd2l1A2A259 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC20.22■□□□□ 0.83
Pkd2l1A2A259 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pkd2l1A2A259 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pkd2l1A2A259 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Pkd2l1A2A259 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC20.22■□□□□ 0.83
Pkd2l1A2A259 Gm5131-201ENSMUST00000212776 1238 ntBASIC20.22■□□□□ 0.83
Pkd2l1A2A259 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pkd2l1A2A259 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pkd2l1A2A259 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pkd2l1A2A259 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Pkd2l1A2A259 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pkd2l1A2A259 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC20.21■□□□□ 0.83
Pkd2l1A2A259 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC20.21■□□□□ 0.83
Pkd2l1A2A259 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC20.21■□□□□ 0.83
Pkd2l1A2A259 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC20.21■□□□□ 0.83
Pkd2l1A2A259 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pkd2l1A2A259 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pkd2l1A2A259 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Pkd2l1A2A259 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pkd2l1A2A259 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Pkd2l1A2A259 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC20.2■□□□□ 0.82
Pkd2l1A2A259 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC20.2■□□□□ 0.82
Pkd2l1A2A259 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC20.2■□□□□ 0.82
Pkd2l1A2A259 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pkd2l1A2A259 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pkd2l1A2A259 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pkd2l1A2A259 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pkd2l1A2A259 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pkd2l1A2A259 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pkd2l1A2A259 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC20.19■□□□□ 0.82
Pkd2l1A2A259 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC20.19■□□□□ 0.82
Pkd2l1A2A259 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC20.19■□□□□ 0.82
Pkd2l1A2A259 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC20.19■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms