Protein–RNA interactions for Protein: A0A140T8P8

Trbv17, T cell receptor beta, variable 17 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv17A0A140T8P8 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trbv17A0A140T8P8 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Trbv17A0A140T8P8 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trbv17A0A140T8P8 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
Trbv17A0A140T8P8 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Trbv17A0A140T8P8 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Trbv17A0A140T8P8 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Trbv17A0A140T8P8 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trbv17A0A140T8P8 AC153962.1-201ENSMUST00000218530 1948 ntBASIC15.94■□□□□ 0.14
Trbv17A0A140T8P8 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trbv17A0A140T8P8 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trbv17A0A140T8P8 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
Trbv17A0A140T8P8 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Trbv17A0A140T8P8 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trbv17A0A140T8P8 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
Trbv17A0A140T8P8 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trbv17A0A140T8P8 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
Trbv17A0A140T8P8 Gm28536-201ENSMUST00000190971 1317 ntBASIC15.94■□□□□ 0.14
Trbv17A0A140T8P8 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trbv17A0A140T8P8 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trbv17A0A140T8P8 Gm26766-202ENSMUST00000227544 2347 ntBASIC15.93■□□□□ 0.14
Trbv17A0A140T8P8 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC15.93■□□□□ 0.14
Trbv17A0A140T8P8 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Trbv17A0A140T8P8 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trbv17A0A140T8P8 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trbv17A0A140T8P8 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trbv17A0A140T8P8 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC15.93■□□□□ 0.14
Trbv17A0A140T8P8 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trbv17A0A140T8P8 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
Trbv17A0A140T8P8 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC15.92■□□□□ 0.14
Trbv17A0A140T8P8 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trbv17A0A140T8P8 Gm45444-201ENSMUST00000211394 898 ntBASIC15.92■□□□□ 0.14
Trbv17A0A140T8P8 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC15.92■□□□□ 0.14
Trbv17A0A140T8P8 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC15.92■□□□□ 0.14
Trbv17A0A140T8P8 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trbv17A0A140T8P8 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trbv17A0A140T8P8 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trbv17A0A140T8P8 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trbv17A0A140T8P8 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trbv17A0A140T8P8 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trbv17A0A140T8P8 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC15.91■□□□□ 0.14
Trbv17A0A140T8P8 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC15.91■□□□□ 0.14
Trbv17A0A140T8P8 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Trbv17A0A140T8P8 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trbv17A0A140T8P8 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Trbv17A0A140T8P8 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trbv17A0A140T8P8 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Trbv17A0A140T8P8 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trbv17A0A140T8P8 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Trbv17A0A140T8P8 Nsd1-206ENSMUST00000224918 1001 ntBASIC15.9■□□□□ 0.14
Trbv17A0A140T8P8 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC15.9■□□□□ 0.14
Trbv17A0A140T8P8 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Trbv17A0A140T8P8 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trbv17A0A140T8P8 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Trbv17A0A140T8P8 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trbv17A0A140T8P8 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC15.9■□□□□ 0.14
Trbv17A0A140T8P8 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Trbv17A0A140T8P8 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trbv17A0A140T8P8 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trbv17A0A140T8P8 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trbv17A0A140T8P8 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Trbv17A0A140T8P8 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC15.89■□□□□ 0.13
Trbv17A0A140T8P8 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trbv17A0A140T8P8 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Trbv17A0A140T8P8 Gm13238-201ENSMUST00000117655 780 ntBASIC15.89■□□□□ 0.13
Trbv17A0A140T8P8 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Trbv17A0A140T8P8 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trbv17A0A140T8P8 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC15.89■□□□□ 0.13
Trbv17A0A140T8P8 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trbv17A0A140T8P8 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trbv17A0A140T8P8 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Trbv17A0A140T8P8 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Trbv17A0A140T8P8 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trbv17A0A140T8P8 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trbv17A0A140T8P8 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC15.88■□□□□ 0.13
Trbv17A0A140T8P8 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trbv17A0A140T8P8 Gm11847-201ENSMUST00000125165 1119 ntBASIC15.88■□□□□ 0.13
Trbv17A0A140T8P8 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Trbv17A0A140T8P8 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC15.88■□□□□ 0.13
Trbv17A0A140T8P8 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Trbv17A0A140T8P8 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trbv17A0A140T8P8 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Trbv17A0A140T8P8 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trbv17A0A140T8P8 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Trbv17A0A140T8P8 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC15.87■□□□□ 0.13
Trbv17A0A140T8P8 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Trbv17A0A140T8P8 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Trbv17A0A140T8P8 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trbv17A0A140T8P8 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC15.87■□□□□ 0.13
Trbv17A0A140T8P8 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trbv17A0A140T8P8 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC15.87■□□□□ 0.13
Trbv17A0A140T8P8 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trbv17A0A140T8P8 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trbv17A0A140T8P8 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trbv17A0A140T8P8 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trbv17A0A140T8P8 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trbv17A0A140T8P8 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trbv17A0A140T8P8 Gm6277-202ENSMUST00000224036 2779 ntBASIC15.86■□□□□ 0.13
Trbv17A0A140T8P8 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Trbv17A0A140T8P8 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms