Protein–RNA interactions for Protein: A0A140T8K2

Rpl13a-ps1, Ribosomal protein 13A, pseudogene 1, mousemouse

Known RBP Predictions only

Length 203 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl13a-ps1A0A140T8K2 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC17.44■□□□□ 0.38
Rpl13a-ps1A0A140T8K2 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Rpl13a-ps1A0A140T8K2 Gm21956-201ENSMUST00000179946 522 ntBASIC17.44■□□□□ 0.38
Rpl13a-ps1A0A140T8K2 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC17.44■□□□□ 0.38
Rpl13a-ps1A0A140T8K2 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC17.44■□□□□ 0.38
Rpl13a-ps1A0A140T8K2 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Rpl13a-ps1A0A140T8K2 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rpl13a-ps1A0A140T8K2 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rpl13a-ps1A0A140T8K2 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rpl13a-ps1A0A140T8K2 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rpl13a-ps1A0A140T8K2 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC17.43■□□□□ 0.38
Rpl13a-ps1A0A140T8K2 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC17.43■□□□□ 0.38
Rpl13a-ps1A0A140T8K2 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC17.43■□□□□ 0.38
Rpl13a-ps1A0A140T8K2 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rpl13a-ps1A0A140T8K2 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rpl13a-ps1A0A140T8K2 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Rpl13a-ps1A0A140T8K2 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Rpl13a-ps1A0A140T8K2 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rpl13a-ps1A0A140T8K2 AC140930.3-201ENSMUST00000222935 274 ntBASIC17.42■□□□□ 0.38
Rpl13a-ps1A0A140T8K2 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC17.42■□□□□ 0.38
Rpl13a-ps1A0A140T8K2 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rpl13a-ps1A0A140T8K2 Gm42699-201ENSMUST00000198104 1657 ntBASIC17.42■□□□□ 0.38
Rpl13a-ps1A0A140T8K2 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rpl13a-ps1A0A140T8K2 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC17.41■□□□□ 0.38
Rpl13a-ps1A0A140T8K2 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rpl13a-ps1A0A140T8K2 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Rpl13a-ps1A0A140T8K2 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rpl13a-ps1A0A140T8K2 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Rpl13a-ps1A0A140T8K2 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rpl13a-ps1A0A140T8K2 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rpl13a-ps1A0A140T8K2 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rpl13a-ps1A0A140T8K2 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rpl13a-ps1A0A140T8K2 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rpl13a-ps1A0A140T8K2 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC17.4■□□□□ 0.38
Rpl13a-ps1A0A140T8K2 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rpl13a-ps1A0A140T8K2 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rpl13a-ps1A0A140T8K2 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Rpl13a-ps1A0A140T8K2 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rpl13a-ps1A0A140T8K2 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC17.4■□□□□ 0.38
Rpl13a-ps1A0A140T8K2 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC17.4■□□□□ 0.38
Rpl13a-ps1A0A140T8K2 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Rpl13a-ps1A0A140T8K2 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rpl13a-ps1A0A140T8K2 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Rpl13a-ps1A0A140T8K2 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC17.39■□□□□ 0.38
Rpl13a-ps1A0A140T8K2 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Rpl13a-ps1A0A140T8K2 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rpl13a-ps1A0A140T8K2 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rpl13a-ps1A0A140T8K2 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rpl13a-ps1A0A140T8K2 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rpl13a-ps1A0A140T8K2 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rpl13a-ps1A0A140T8K2 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rpl13a-ps1A0A140T8K2 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC17.38■□□□□ 0.37
Rpl13a-ps1A0A140T8K2 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC17.38■□□□□ 0.37
Rpl13a-ps1A0A140T8K2 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rpl13a-ps1A0A140T8K2 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rpl13a-ps1A0A140T8K2 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rpl13a-ps1A0A140T8K2 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rpl13a-ps1A0A140T8K2 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rpl13a-ps1A0A140T8K2 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rpl13a-ps1A0A140T8K2 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rpl13a-ps1A0A140T8K2 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC17.37■□□□□ 0.37
Rpl13a-ps1A0A140T8K2 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rpl13a-ps1A0A140T8K2 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC17.37■□□□□ 0.37
Rpl13a-ps1A0A140T8K2 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Rpl13a-ps1A0A140T8K2 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rpl13a-ps1A0A140T8K2 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rpl13a-ps1A0A140T8K2 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rpl13a-ps1A0A140T8K2 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rpl13a-ps1A0A140T8K2 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Rpl13a-ps1A0A140T8K2 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC17.37■□□□□ 0.37
Rpl13a-ps1A0A140T8K2 H3f3aos-201ENSMUST00000097448 2905 ntBASIC17.36■□□□□ 0.37
Rpl13a-ps1A0A140T8K2 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC17.36■□□□□ 0.37
Rpl13a-ps1A0A140T8K2 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC17.36■□□□□ 0.37
Rpl13a-ps1A0A140T8K2 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC17.36■□□□□ 0.37
Rpl13a-ps1A0A140T8K2 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rpl13a-ps1A0A140T8K2 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Rpl13a-ps1A0A140T8K2 Golgb1-201ENSMUST00000023534 498 ntBASIC17.36■□□□□ 0.37
Rpl13a-ps1A0A140T8K2 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rpl13a-ps1A0A140T8K2 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rpl13a-ps1A0A140T8K2 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Rpl13a-ps1A0A140T8K2 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rpl13a-ps1A0A140T8K2 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Rpl13a-ps1A0A140T8K2 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rpl13a-ps1A0A140T8K2 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rpl13a-ps1A0A140T8K2 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rpl13a-ps1A0A140T8K2 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rpl13a-ps1A0A140T8K2 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC17.35■□□□□ 0.37
Rpl13a-ps1A0A140T8K2 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC17.35■□□□□ 0.37
Rpl13a-ps1A0A140T8K2 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rpl13a-ps1A0A140T8K2 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Rpl13a-ps1A0A140T8K2 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC17.35■□□□□ 0.37
Rpl13a-ps1A0A140T8K2 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rpl13a-ps1A0A140T8K2 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rpl13a-ps1A0A140T8K2 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rpl13a-ps1A0A140T8K2 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rpl13a-ps1A0A140T8K2 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rpl13a-ps1A0A140T8K2 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC17.34■□□□□ 0.37
Rpl13a-ps1A0A140T8K2 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC17.34■□□□□ 0.37
Rpl13a-ps1A0A140T8K2 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rpl13a-ps1A0A140T8K2 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 164.1 ms