Protein–RNA interactions for Protein: A0A0G2LB96

Trbv29, T cell receptor beta, variable 29 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv29A0A0G2LB96 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC17.34■□□□□ 0.37
Trbv29A0A0G2LB96 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Trbv29A0A0G2LB96 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trbv29A0A0G2LB96 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trbv29A0A0G2LB96 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Trbv29A0A0G2LB96 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Trbv29A0A0G2LB96 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Trbv29A0A0G2LB96 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC17.33■□□□□ 0.37
Trbv29A0A0G2LB96 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trbv29A0A0G2LB96 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trbv29A0A0G2LB96 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC17.33■□□□□ 0.36
Trbv29A0A0G2LB96 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trbv29A0A0G2LB96 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Trbv29A0A0G2LB96 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Trbv29A0A0G2LB96 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trbv29A0A0G2LB96 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC17.33■□□□□ 0.36
Trbv29A0A0G2LB96 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Trbv29A0A0G2LB96 Gm5913-201ENSMUST00000119397 1399 ntBASIC17.32■□□□□ 0.36
Trbv29A0A0G2LB96 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Trbv29A0A0G2LB96 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trbv29A0A0G2LB96 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trbv29A0A0G2LB96 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC17.32■□□□□ 0.36
Trbv29A0A0G2LB96 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trbv29A0A0G2LB96 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC17.32■□□□□ 0.36
Trbv29A0A0G2LB96 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trbv29A0A0G2LB96 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trbv29A0A0G2LB96 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Trbv29A0A0G2LB96 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC17.31■□□□□ 0.36
Trbv29A0A0G2LB96 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trbv29A0A0G2LB96 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trbv29A0A0G2LB96 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trbv29A0A0G2LB96 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Trbv29A0A0G2LB96 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trbv29A0A0G2LB96 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trbv29A0A0G2LB96 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trbv29A0A0G2LB96 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Trbv29A0A0G2LB96 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trbv29A0A0G2LB96 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC17.3■□□□□ 0.36
Trbv29A0A0G2LB96 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trbv29A0A0G2LB96 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trbv29A0A0G2LB96 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Trbv29A0A0G2LB96 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trbv29A0A0G2LB96 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trbv29A0A0G2LB96 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trbv29A0A0G2LB96 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trbv29A0A0G2LB96 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC17.29■□□□□ 0.36
Trbv29A0A0G2LB96 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Trbv29A0A0G2LB96 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trbv29A0A0G2LB96 AC116713.1-201ENSMUST00000215074 430 ntBASIC17.29■□□□□ 0.36
Trbv29A0A0G2LB96 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trbv29A0A0G2LB96 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
Trbv29A0A0G2LB96 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Trbv29A0A0G2LB96 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Trbv29A0A0G2LB96 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trbv29A0A0G2LB96 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trbv29A0A0G2LB96 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trbv29A0A0G2LB96 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trbv29A0A0G2LB96 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Trbv29A0A0G2LB96 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Trbv29A0A0G2LB96 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trbv29A0A0G2LB96 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trbv29A0A0G2LB96 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trbv29A0A0G2LB96 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Trbv29A0A0G2LB96 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Trbv29A0A0G2LB96 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trbv29A0A0G2LB96 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Trbv29A0A0G2LB96 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC17.28■□□□□ 0.36
Trbv29A0A0G2LB96 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trbv29A0A0G2LB96 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trbv29A0A0G2LB96 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Trbv29A0A0G2LB96 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC17.28■□□□□ 0.36
Trbv29A0A0G2LB96 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Trbv29A0A0G2LB96 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Trbv29A0A0G2LB96 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trbv29A0A0G2LB96 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trbv29A0A0G2LB96 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trbv29A0A0G2LB96 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trbv29A0A0G2LB96 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC17.27■□□□□ 0.36
Trbv29A0A0G2LB96 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC17.27■□□□□ 0.36
Trbv29A0A0G2LB96 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Trbv29A0A0G2LB96 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC17.27■□□□□ 0.36
Trbv29A0A0G2LB96 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trbv29A0A0G2LB96 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC17.27■□□□□ 0.35
Trbv29A0A0G2LB96 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Trbv29A0A0G2LB96 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Trbv29A0A0G2LB96 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC17.27■□□□□ 0.35
Trbv29A0A0G2LB96 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Trbv29A0A0G2LB96 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Trbv29A0A0G2LB96 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
Trbv29A0A0G2LB96 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Trbv29A0A0G2LB96 AC158990.1-201ENSMUST00000221450 2016 ntBASIC17.26■□□□□ 0.35
Trbv29A0A0G2LB96 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trbv29A0A0G2LB96 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Trbv29A0A0G2LB96 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC17.26■□□□□ 0.35
Trbv29A0A0G2LB96 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC17.26■□□□□ 0.35
Trbv29A0A0G2LB96 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trbv29A0A0G2LB96 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trbv29A0A0G2LB96 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Trbv29A0A0G2LB96 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trbv29A0A0G2LB96 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 16.7 ms