Protein–RNA interactions for Protein: A0A0G2JFX6

Trav7-5, T cell receptor alpha variable 7-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7-5A0A0G2JFX6 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Trav7-5A0A0G2JFX6 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav7-5A0A0G2JFX6 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav7-5A0A0G2JFX6 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Trav7-5A0A0G2JFX6 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav7-5A0A0G2JFX6 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
Trav7-5A0A0G2JFX6 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC16.39■□□□□ 0.21
Trav7-5A0A0G2JFX6 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Trav7-5A0A0G2JFX6 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav7-5A0A0G2JFX6 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav7-5A0A0G2JFX6 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav7-5A0A0G2JFX6 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Trav7-5A0A0G2JFX6 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav7-5A0A0G2JFX6 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav7-5A0A0G2JFX6 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav7-5A0A0G2JFX6 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC16.38■□□□□ 0.21
Trav7-5A0A0G2JFX6 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav7-5A0A0G2JFX6 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav7-5A0A0G2JFX6 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav7-5A0A0G2JFX6 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav7-5A0A0G2JFX6 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav7-5A0A0G2JFX6 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav7-5A0A0G2JFX6 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav7-5A0A0G2JFX6 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav7-5A0A0G2JFX6 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC16.37■□□□□ 0.21
Trav7-5A0A0G2JFX6 Gm15820-201ENSMUST00000201566 728 ntBASIC16.37■□□□□ 0.21
Trav7-5A0A0G2JFX6 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC16.37■□□□□ 0.21
Trav7-5A0A0G2JFX6 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav7-5A0A0G2JFX6 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Trav7-5A0A0G2JFX6 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav7-5A0A0G2JFX6 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Trav7-5A0A0G2JFX6 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav7-5A0A0G2JFX6 Gm8093-201ENSMUST00000128935 1892 ntBASIC16.37■□□□□ 0.21
Trav7-5A0A0G2JFX6 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC16.37■□□□□ 0.21
Trav7-5A0A0G2JFX6 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav7-5A0A0G2JFX6 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav7-5A0A0G2JFX6 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC16.36■□□□□ 0.21
Trav7-5A0A0G2JFX6 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav7-5A0A0G2JFX6 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav7-5A0A0G2JFX6 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav7-5A0A0G2JFX6 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav7-5A0A0G2JFX6 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Trav7-5A0A0G2JFX6 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC16.36■□□□□ 0.21
Trav7-5A0A0G2JFX6 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav7-5A0A0G2JFX6 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC16.36■□□□□ 0.21
Trav7-5A0A0G2JFX6 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Trav7-5A0A0G2JFX6 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav7-5A0A0G2JFX6 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC16.36■□□□□ 0.21
Trav7-5A0A0G2JFX6 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav7-5A0A0G2JFX6 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav7-5A0A0G2JFX6 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav7-5A0A0G2JFX6 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
Trav7-5A0A0G2JFX6 Gm10399-202ENSMUST00000202768 748 ntBASIC16.35■□□□□ 0.21
Trav7-5A0A0G2JFX6 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC16.35■□□□□ 0.21
Trav7-5A0A0G2JFX6 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC16.35■□□□□ 0.21
Trav7-5A0A0G2JFX6 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Trav7-5A0A0G2JFX6 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC16.35■□□□□ 0.21
Trav7-5A0A0G2JFX6 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav7-5A0A0G2JFX6 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav7-5A0A0G2JFX6 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav7-5A0A0G2JFX6 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav7-5A0A0G2JFX6 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trav7-5A0A0G2JFX6 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trav7-5A0A0G2JFX6 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Trav7-5A0A0G2JFX6 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Trav7-5A0A0G2JFX6 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trav7-5A0A0G2JFX6 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC16.34■□□□□ 0.21
Trav7-5A0A0G2JFX6 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC16.34■□□□□ 0.21
Trav7-5A0A0G2JFX6 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trav7-5A0A0G2JFX6 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trav7-5A0A0G2JFX6 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC16.33■□□□□ 0.2
Trav7-5A0A0G2JFX6 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC16.33■□□□□ 0.2
Trav7-5A0A0G2JFX6 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC16.33■□□□□ 0.2
Trav7-5A0A0G2JFX6 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trav7-5A0A0G2JFX6 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Trav7-5A0A0G2JFX6 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC16.32■□□□□ 0.2
Trav7-5A0A0G2JFX6 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trav7-5A0A0G2JFX6 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC16.32■□□□□ 0.2
Trav7-5A0A0G2JFX6 Gm26766-202ENSMUST00000227544 2347 ntBASIC16.32■□□□□ 0.2
Trav7-5A0A0G2JFX6 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trav7-5A0A0G2JFX6 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trav7-5A0A0G2JFX6 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Trav7-5A0A0G2JFX6 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trav7-5A0A0G2JFX6 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trav7-5A0A0G2JFX6 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav7-5A0A0G2JFX6 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC16.31■□□□□ 0.2
Trav7-5A0A0G2JFX6 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC16.31■□□□□ 0.2
Trav7-5A0A0G2JFX6 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Trav7-5A0A0G2JFX6 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC16.31■□□□□ 0.2
Trav7-5A0A0G2JFX6 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav7-5A0A0G2JFX6 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav7-5A0A0G2JFX6 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav7-5A0A0G2JFX6 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC16.31■□□□□ 0.2
Trav7-5A0A0G2JFX6 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav7-5A0A0G2JFX6 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav7-5A0A0G2JFX6 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav7-5A0A0G2JFX6 Gm13042-201ENSMUST00000119244 1955 ntBASIC16.31■□□□□ 0.2
Trav7-5A0A0G2JFX6 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav7-5A0A0G2JFX6 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Trav7-5A0A0G2JFX6 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 12.3 ms