Protein–RNA interactions for Protein: A0A0G2JEW2

Tcrg-V3, T cell receptor gamma, variable 3 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tcrg-V3A0A0G2JEW2 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Tcrg-V3A0A0G2JEW2 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Tcrg-V3A0A0G2JEW2 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Tcrg-V3A0A0G2JEW2 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Tcrg-V3A0A0G2JEW2 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Tcrg-V3A0A0G2JEW2 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Tcrg-V3A0A0G2JEW2 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Tcrg-V3A0A0G2JEW2 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Tcrg-V3A0A0G2JEW2 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Tcrg-V3A0A0G2JEW2 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Tcrg-V3A0A0G2JEW2 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Tcrg-V3A0A0G2JEW2 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Tcrg-V3A0A0G2JEW2 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Tcrg-V3A0A0G2JEW2 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Tcrg-V3A0A0G2JEW2 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Tcrg-V3A0A0G2JEW2 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
Tcrg-V3A0A0G2JEW2 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Tcrg-V3A0A0G2JEW2 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Tcrg-V3A0A0G2JEW2 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Tcrg-V3A0A0G2JEW2 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Tcrg-V3A0A0G2JEW2 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Tcrg-V3A0A0G2JEW2 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Tcrg-V3A0A0G2JEW2 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Tcrg-V3A0A0G2JEW2 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Tcrg-V3A0A0G2JEW2 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Tcrg-V3A0A0G2JEW2 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Tcrg-V3A0A0G2JEW2 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Tcrg-V3A0A0G2JEW2 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Tcrg-V3A0A0G2JEW2 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Tcrg-V3A0A0G2JEW2 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Tcrg-V3A0A0G2JEW2 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Tcrg-V3A0A0G2JEW2 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Tcrg-V3A0A0G2JEW2 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Tcrg-V3A0A0G2JEW2 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC20.25■□□□□ 0.83
Tcrg-V3A0A0G2JEW2 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Tcrg-V3A0A0G2JEW2 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC20.25■□□□□ 0.83
Tcrg-V3A0A0G2JEW2 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Tcrg-V3A0A0G2JEW2 Gm37415-201ENSMUST00000192265 2054 ntBASIC20.24■□□□□ 0.83
Tcrg-V3A0A0G2JEW2 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC20.24■□□□□ 0.83
Tcrg-V3A0A0G2JEW2 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Tcrg-V3A0A0G2JEW2 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Tcrg-V3A0A0G2JEW2 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Tcrg-V3A0A0G2JEW2 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Tcrg-V3A0A0G2JEW2 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Tcrg-V3A0A0G2JEW2 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Tcrg-V3A0A0G2JEW2 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Tcrg-V3A0A0G2JEW2 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Tcrg-V3A0A0G2JEW2 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Tcrg-V3A0A0G2JEW2 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Tcrg-V3A0A0G2JEW2 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Tcrg-V3A0A0G2JEW2 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC20.22■□□□□ 0.83
Tcrg-V3A0A0G2JEW2 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC20.22■□□□□ 0.83
Tcrg-V3A0A0G2JEW2 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Tcrg-V3A0A0G2JEW2 Gm26766-202ENSMUST00000227544 2347 ntBASIC20.22■□□□□ 0.83
Tcrg-V3A0A0G2JEW2 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Tcrg-V3A0A0G2JEW2 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Tcrg-V3A0A0G2JEW2 AC164883.3-201ENSMUST00000227396 1774 ntBASIC20.21■□□□□ 0.83
Tcrg-V3A0A0G2JEW2 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC20.21■□□□□ 0.83
Tcrg-V3A0A0G2JEW2 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Tcrg-V3A0A0G2JEW2 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Tcrg-V3A0A0G2JEW2 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Tcrg-V3A0A0G2JEW2 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Tcrg-V3A0A0G2JEW2 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Tcrg-V3A0A0G2JEW2 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Tcrg-V3A0A0G2JEW2 Gm4430-201ENSMUST00000192413 1943 ntBASIC20.2■□□□□ 0.82
Tcrg-V3A0A0G2JEW2 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Tcrg-V3A0A0G2JEW2 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Tcrg-V3A0A0G2JEW2 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC20.2■□□□□ 0.82
Tcrg-V3A0A0G2JEW2 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Tcrg-V3A0A0G2JEW2 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Tcrg-V3A0A0G2JEW2 Kdm3b-204ENSMUST00000224715 2032 ntBASIC20.2■□□□□ 0.82
Tcrg-V3A0A0G2JEW2 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Tcrg-V3A0A0G2JEW2 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Tcrg-V3A0A0G2JEW2 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC20.19■□□□□ 0.82
Tcrg-V3A0A0G2JEW2 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC20.19■□□□□ 0.82
Tcrg-V3A0A0G2JEW2 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Tcrg-V3A0A0G2JEW2 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Tcrg-V3A0A0G2JEW2 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Tcrg-V3A0A0G2JEW2 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Tcrg-V3A0A0G2JEW2 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Tcrg-V3A0A0G2JEW2 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Tcrg-V3A0A0G2JEW2 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Tcrg-V3A0A0G2JEW2 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Tcrg-V3A0A0G2JEW2 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC20.18■□□□□ 0.82
Tcrg-V3A0A0G2JEW2 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Tcrg-V3A0A0G2JEW2 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC20.18■□□□□ 0.82
Tcrg-V3A0A0G2JEW2 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC20.18■□□□□ 0.82
Tcrg-V3A0A0G2JEW2 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Tcrg-V3A0A0G2JEW2 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Tcrg-V3A0A0G2JEW2 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Tcrg-V3A0A0G2JEW2 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC20.17■□□□□ 0.82
Tcrg-V3A0A0G2JEW2 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC20.17■□□□□ 0.82
Tcrg-V3A0A0G2JEW2 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Tcrg-V3A0A0G2JEW2 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Tcrg-V3A0A0G2JEW2 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC20.16■□□□□ 0.82
Tcrg-V3A0A0G2JEW2 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Tcrg-V3A0A0G2JEW2 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Tcrg-V3A0A0G2JEW2 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Tcrg-V3A0A0G2JEW2 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC20.15■□□□□ 0.82
Tcrg-V3A0A0G2JEW2 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 76.6 ms