Protein–RNA interactions for Protein: A0A0A6YXN8

Sirpb1b, Signal-regulatory protein beta 1B, mousemouse

Predictions only

Length 397 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sirpb1bA0A0A6YXN8 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Sirpb1bA0A0A6YXN8 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Sirpb1bA0A0A6YXN8 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Sirpb1bA0A0A6YXN8 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC18.37■□□□□ 0.53
Sirpb1bA0A0A6YXN8 Gm45102-201ENSMUST00000207427 857 ntBASIC18.37■□□□□ 0.53
Sirpb1bA0A0A6YXN8 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Sirpb1bA0A0A6YXN8 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Sirpb1bA0A0A6YXN8 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Sirpb1bA0A0A6YXN8 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Sirpb1bA0A0A6YXN8 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Sirpb1bA0A0A6YXN8 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Sirpb1bA0A0A6YXN8 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Sirpb1bA0A0A6YXN8 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Sirpb1bA0A0A6YXN8 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Sirpb1bA0A0A6YXN8 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Sirpb1bA0A0A6YXN8 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Sirpb1bA0A0A6YXN8 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Sirpb1bA0A0A6YXN8 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Sirpb1bA0A0A6YXN8 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Sirpb1bA0A0A6YXN8 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC18.35■□□□□ 0.53
Sirpb1bA0A0A6YXN8 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Sirpb1bA0A0A6YXN8 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Sirpb1bA0A0A6YXN8 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC18.34■□□□□ 0.53
Sirpb1bA0A0A6YXN8 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Sirpb1bA0A0A6YXN8 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Sirpb1bA0A0A6YXN8 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Sirpb1bA0A0A6YXN8 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
Sirpb1bA0A0A6YXN8 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Sirpb1bA0A0A6YXN8 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Sirpb1bA0A0A6YXN8 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Sirpb1bA0A0A6YXN8 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Sirpb1bA0A0A6YXN8 Gm18755-201ENSMUST00000218030 1099 ntBASIC18.33■□□□□ 0.52
Sirpb1bA0A0A6YXN8 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Sirpb1bA0A0A6YXN8 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Sirpb1bA0A0A6YXN8 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC18.33■□□□□ 0.52
Sirpb1bA0A0A6YXN8 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Sirpb1bA0A0A6YXN8 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Sirpb1bA0A0A6YXN8 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Sirpb1bA0A0A6YXN8 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Sirpb1bA0A0A6YXN8 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Sirpb1bA0A0A6YXN8 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Sirpb1bA0A0A6YXN8 Gm9959-201ENSMUST00000068277 390 ntBASIC18.32■□□□□ 0.52
Sirpb1bA0A0A6YXN8 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC18.32■□□□□ 0.52
Sirpb1bA0A0A6YXN8 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Sirpb1bA0A0A6YXN8 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sirpb1bA0A0A6YXN8 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sirpb1bA0A0A6YXN8 Gm42418-201ENSMUST00000182010 1831 ntBASIC18.31■□□□□ 0.52
Sirpb1bA0A0A6YXN8 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sirpb1bA0A0A6YXN8 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sirpb1bA0A0A6YXN8 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sirpb1bA0A0A6YXN8 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC18.31■□□□□ 0.52
Sirpb1bA0A0A6YXN8 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sirpb1bA0A0A6YXN8 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sirpb1bA0A0A6YXN8 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Sirpb1bA0A0A6YXN8 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Sirpb1bA0A0A6YXN8 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Sirpb1bA0A0A6YXN8 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Sirpb1bA0A0A6YXN8 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Sirpb1bA0A0A6YXN8 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Sirpb1bA0A0A6YXN8 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Sirpb1bA0A0A6YXN8 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC18.3■□□□□ 0.52
Sirpb1bA0A0A6YXN8 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Sirpb1bA0A0A6YXN8 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Sirpb1bA0A0A6YXN8 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Sirpb1bA0A0A6YXN8 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Sirpb1bA0A0A6YXN8 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Sirpb1bA0A0A6YXN8 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Sirpb1bA0A0A6YXN8 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC18.29■□□□□ 0.52
Sirpb1bA0A0A6YXN8 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Sirpb1bA0A0A6YXN8 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Sirpb1bA0A0A6YXN8 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Sirpb1bA0A0A6YXN8 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC18.28■□□□□ 0.52
Sirpb1bA0A0A6YXN8 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Sirpb1bA0A0A6YXN8 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Sirpb1bA0A0A6YXN8 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Sirpb1bA0A0A6YXN8 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC18.28■□□□□ 0.52
Sirpb1bA0A0A6YXN8 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Sirpb1bA0A0A6YXN8 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Sirpb1bA0A0A6YXN8 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC18.28■□□□□ 0.52
Sirpb1bA0A0A6YXN8 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
Sirpb1bA0A0A6YXN8 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Sirpb1bA0A0A6YXN8 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC18.27■□□□□ 0.52
Sirpb1bA0A0A6YXN8 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
Sirpb1bA0A0A6YXN8 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC18.27■□□□□ 0.52
Sirpb1bA0A0A6YXN8 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Sirpb1bA0A0A6YXN8 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Sirpb1bA0A0A6YXN8 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC18.27■□□□□ 0.52
Sirpb1bA0A0A6YXN8 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC18.27■□□□□ 0.52
Sirpb1bA0A0A6YXN8 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Sirpb1bA0A0A6YXN8 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Sirpb1bA0A0A6YXN8 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Sirpb1bA0A0A6YXN8 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Sirpb1bA0A0A6YXN8 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Sirpb1bA0A0A6YXN8 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC18.27■□□□□ 0.51
Sirpb1bA0A0A6YXN8 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.51
Sirpb1bA0A0A6YXN8 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Sirpb1bA0A0A6YXN8 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Sirpb1bA0A0A6YXN8 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Sirpb1bA0A0A6YXN8 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Sirpb1bA0A0A6YXN8 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms