Protein–RNA interactions for Protein: A0A0A6YXN8

Sirpb1b, Signal-regulatory protein beta 1B, mousemouse

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sirpb1bA0A0A6YXN8 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Sirpb1bA0A0A6YXN8 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Sirpb1bA0A0A6YXN8 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Sirpb1bA0A0A6YXN8 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC18.37■□□□□ 0.53
Sirpb1bA0A0A6YXN8 Gm45102-201ENSMUST00000207427 857 ntBASIC18.37■□□□□ 0.53
Sirpb1bA0A0A6YXN8 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Sirpb1bA0A0A6YXN8 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Sirpb1bA0A0A6YXN8 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Sirpb1bA0A0A6YXN8 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Sirpb1bA0A0A6YXN8 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Sirpb1bA0A0A6YXN8 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Sirpb1bA0A0A6YXN8 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Sirpb1bA0A0A6YXN8 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Sirpb1bA0A0A6YXN8 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Sirpb1bA0A0A6YXN8 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Sirpb1bA0A0A6YXN8 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Sirpb1bA0A0A6YXN8 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Sirpb1bA0A0A6YXN8 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Sirpb1bA0A0A6YXN8 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Sirpb1bA0A0A6YXN8 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC18.35■□□□□ 0.53
Sirpb1bA0A0A6YXN8 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Sirpb1bA0A0A6YXN8 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Sirpb1bA0A0A6YXN8 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC18.34■□□□□ 0.53
Sirpb1bA0A0A6YXN8 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Sirpb1bA0A0A6YXN8 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Sirpb1bA0A0A6YXN8 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Sirpb1bA0A0A6YXN8 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
Sirpb1bA0A0A6YXN8 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Sirpb1bA0A0A6YXN8 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Sirpb1bA0A0A6YXN8 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Sirpb1bA0A0A6YXN8 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Sirpb1bA0A0A6YXN8 Gm18755-201ENSMUST00000218030 1099 ntBASIC18.33■□□□□ 0.52
Sirpb1bA0A0A6YXN8 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Sirpb1bA0A0A6YXN8 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Sirpb1bA0A0A6YXN8 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC18.33■□□□□ 0.52
Sirpb1bA0A0A6YXN8 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Sirpb1bA0A0A6YXN8 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Sirpb1bA0A0A6YXN8 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Sirpb1bA0A0A6YXN8 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Sirpb1bA0A0A6YXN8 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Sirpb1bA0A0A6YXN8 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Sirpb1bA0A0A6YXN8 Gm9959-201ENSMUST00000068277 390 ntBASIC18.32■□□□□ 0.52
Sirpb1bA0A0A6YXN8 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC18.32■□□□□ 0.52
Sirpb1bA0A0A6YXN8 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Sirpb1bA0A0A6YXN8 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sirpb1bA0A0A6YXN8 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sirpb1bA0A0A6YXN8 Gm42418-201ENSMUST00000182010 1831 ntBASIC18.31■□□□□ 0.52
Sirpb1bA0A0A6YXN8 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sirpb1bA0A0A6YXN8 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sirpb1bA0A0A6YXN8 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sirpb1bA0A0A6YXN8 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC18.31■□□□□ 0.52
Sirpb1bA0A0A6YXN8 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sirpb1bA0A0A6YXN8 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sirpb1bA0A0A6YXN8 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Sirpb1bA0A0A6YXN8 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Sirpb1bA0A0A6YXN8 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Sirpb1bA0A0A6YXN8 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Sirpb1bA0A0A6YXN8 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Sirpb1bA0A0A6YXN8 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Sirpb1bA0A0A6YXN8 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Sirpb1bA0A0A6YXN8 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC18.3■□□□□ 0.52
Sirpb1bA0A0A6YXN8 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Sirpb1bA0A0A6YXN8 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Sirpb1bA0A0A6YXN8 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Sirpb1bA0A0A6YXN8 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Sirpb1bA0A0A6YXN8 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Sirpb1bA0A0A6YXN8 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Sirpb1bA0A0A6YXN8 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC18.29■□□□□ 0.52
Sirpb1bA0A0A6YXN8 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Sirpb1bA0A0A6YXN8 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Sirpb1bA0A0A6YXN8 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Sirpb1bA0A0A6YXN8 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC18.28■□□□□ 0.52
Sirpb1bA0A0A6YXN8 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Sirpb1bA0A0A6YXN8 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Sirpb1bA0A0A6YXN8 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Sirpb1bA0A0A6YXN8 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC18.28■□□□□ 0.52
Sirpb1bA0A0A6YXN8 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Sirpb1bA0A0A6YXN8 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Sirpb1bA0A0A6YXN8 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC18.28■□□□□ 0.52
Sirpb1bA0A0A6YXN8 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
Sirpb1bA0A0A6YXN8 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Sirpb1bA0A0A6YXN8 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC18.27■□□□□ 0.52
Sirpb1bA0A0A6YXN8 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
Sirpb1bA0A0A6YXN8 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC18.27■□□□□ 0.52
Sirpb1bA0A0A6YXN8 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Sirpb1bA0A0A6YXN8 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Sirpb1bA0A0A6YXN8 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC18.27■□□□□ 0.52
Sirpb1bA0A0A6YXN8 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC18.27■□□□□ 0.52
Sirpb1bA0A0A6YXN8 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Sirpb1bA0A0A6YXN8 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Sirpb1bA0A0A6YXN8 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Sirpb1bA0A0A6YXN8 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Sirpb1bA0A0A6YXN8 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Sirpb1bA0A0A6YXN8 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC18.27■□□□□ 0.51
Sirpb1bA0A0A6YXN8 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.51
Sirpb1bA0A0A6YXN8 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Sirpb1bA0A0A6YXN8 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Sirpb1bA0A0A6YXN8 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Sirpb1bA0A0A6YXN8 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Sirpb1bA0A0A6YXN8 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms