Protein–RNA interactions for Protein: A0A0A6YWQ1

Trbv23, T cell receptor beta, variable V23 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv23A0A0A6YWQ1 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Trbv23A0A0A6YWQ1 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Trbv23A0A0A6YWQ1 Kdm3b-204ENSMUST00000224715 2032 ntBASIC17.88■□□□□ 0.45
Trbv23A0A0A6YWQ1 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC17.88■□□□□ 0.45
Trbv23A0A0A6YWQ1 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
Trbv23A0A0A6YWQ1 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trbv23A0A0A6YWQ1 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Trbv23A0A0A6YWQ1 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trbv23A0A0A6YWQ1 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Trbv23A0A0A6YWQ1 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trbv23A0A0A6YWQ1 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trbv23A0A0A6YWQ1 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC17.87■□□□□ 0.45
Trbv23A0A0A6YWQ1 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Trbv23A0A0A6YWQ1 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trbv23A0A0A6YWQ1 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trbv23A0A0A6YWQ1 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Trbv23A0A0A6YWQ1 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trbv23A0A0A6YWQ1 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trbv23A0A0A6YWQ1 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trbv23A0A0A6YWQ1 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Trbv23A0A0A6YWQ1 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Trbv23A0A0A6YWQ1 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC17.86■□□□□ 0.45
Trbv23A0A0A6YWQ1 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Trbv23A0A0A6YWQ1 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trbv23A0A0A6YWQ1 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trbv23A0A0A6YWQ1 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Trbv23A0A0A6YWQ1 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Trbv23A0A0A6YWQ1 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trbv23A0A0A6YWQ1 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC17.85■□□□□ 0.45
Trbv23A0A0A6YWQ1 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trbv23A0A0A6YWQ1 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trbv23A0A0A6YWQ1 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trbv23A0A0A6YWQ1 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trbv23A0A0A6YWQ1 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trbv23A0A0A6YWQ1 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trbv23A0A0A6YWQ1 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trbv23A0A0A6YWQ1 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Trbv23A0A0A6YWQ1 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Trbv23A0A0A6YWQ1 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Trbv23A0A0A6YWQ1 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trbv23A0A0A6YWQ1 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC17.84■□□□□ 0.45
Trbv23A0A0A6YWQ1 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trbv23A0A0A6YWQ1 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC17.84■□□□□ 0.45
Trbv23A0A0A6YWQ1 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC17.84■□□□□ 0.45
Trbv23A0A0A6YWQ1 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trbv23A0A0A6YWQ1 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trbv23A0A0A6YWQ1 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Trbv23A0A0A6YWQ1 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trbv23A0A0A6YWQ1 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Trbv23A0A0A6YWQ1 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
Trbv23A0A0A6YWQ1 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Trbv23A0A0A6YWQ1 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC17.83■□□□□ 0.45
Trbv23A0A0A6YWQ1 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC17.83■□□□□ 0.44
Trbv23A0A0A6YWQ1 Gm27502-201ENSMUST00000183495 199 ntBASIC17.83■□□□□ 0.44
Trbv23A0A0A6YWQ1 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trbv23A0A0A6YWQ1 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trbv23A0A0A6YWQ1 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trbv23A0A0A6YWQ1 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Trbv23A0A0A6YWQ1 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
Trbv23A0A0A6YWQ1 Gm7199-201ENSMUST00000118327 1485 ntBASIC17.82■□□□□ 0.44
Trbv23A0A0A6YWQ1 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trbv23A0A0A6YWQ1 AC151971.4-201ENSMUST00000214717 704 ntBASIC17.82■□□□□ 0.44
Trbv23A0A0A6YWQ1 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trbv23A0A0A6YWQ1 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trbv23A0A0A6YWQ1 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Trbv23A0A0A6YWQ1 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Trbv23A0A0A6YWQ1 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Trbv23A0A0A6YWQ1 AC117769.4-201ENSMUST00000225679 685 ntBASIC17.81■□□□□ 0.44
Trbv23A0A0A6YWQ1 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trbv23A0A0A6YWQ1 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trbv23A0A0A6YWQ1 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trbv23A0A0A6YWQ1 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trbv23A0A0A6YWQ1 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Trbv23A0A0A6YWQ1 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trbv23A0A0A6YWQ1 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Trbv23A0A0A6YWQ1 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC17.8■□□□□ 0.44
Trbv23A0A0A6YWQ1 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Trbv23A0A0A6YWQ1 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trbv23A0A0A6YWQ1 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trbv23A0A0A6YWQ1 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC17.79■□□□□ 0.44
Trbv23A0A0A6YWQ1 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trbv23A0A0A6YWQ1 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Trbv23A0A0A6YWQ1 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC17.79■□□□□ 0.44
Trbv23A0A0A6YWQ1 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Trbv23A0A0A6YWQ1 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trbv23A0A0A6YWQ1 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC17.78■□□□□ 0.44
Trbv23A0A0A6YWQ1 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trbv23A0A0A6YWQ1 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Trbv23A0A0A6YWQ1 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Trbv23A0A0A6YWQ1 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trbv23A0A0A6YWQ1 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Trbv23A0A0A6YWQ1 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC17.77■□□□□ 0.43
Trbv23A0A0A6YWQ1 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trbv23A0A0A6YWQ1 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trbv23A0A0A6YWQ1 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Trbv23A0A0A6YWQ1 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trbv23A0A0A6YWQ1 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trbv23A0A0A6YWQ1 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC17.76■□□□□ 0.43
Trbv23A0A0A6YWQ1 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Trbv23A0A0A6YWQ1 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms