Protein–RNA interactions for Protein: A0A0A6YVW3

Ighv1-23, Immunoglobulin heavy variable V1-23 (Fragment), mousemouse

Predictions only

Length 117 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-23A0A0A6YVW3 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Ighv1-23A0A0A6YVW3 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Ighv1-23A0A0A6YVW3 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Ighv1-23A0A0A6YVW3 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ighv1-23A0A0A6YVW3 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ighv1-23A0A0A6YVW3 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC15.51■□□□□ 0.07
Ighv1-23A0A0A6YVW3 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Ighv1-23A0A0A6YVW3 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Ighv1-23A0A0A6YVW3 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC15.5■□□□□ 0.07
Ighv1-23A0A0A6YVW3 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ighv1-23A0A0A6YVW3 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Ighv1-23A0A0A6YVW3 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ighv1-23A0A0A6YVW3 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ighv1-23A0A0A6YVW3 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ighv1-23A0A0A6YVW3 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ighv1-23A0A0A6YVW3 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ighv1-23A0A0A6YVW3 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ighv1-23A0A0A6YVW3 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
Ighv1-23A0A0A6YVW3 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ighv1-23A0A0A6YVW3 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ighv1-23A0A0A6YVW3 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ighv1-23A0A0A6YVW3 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ighv1-23A0A0A6YVW3 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ighv1-23A0A0A6YVW3 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
Ighv1-23A0A0A6YVW3 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ighv1-23A0A0A6YVW3 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ighv1-23A0A0A6YVW3 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC15.49■□□□□ 0.07
Ighv1-23A0A0A6YVW3 Gm5913-201ENSMUST00000119397 1399 ntBASIC15.49■□□□□ 0.07
Ighv1-23A0A0A6YVW3 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ighv1-23A0A0A6YVW3 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC15.48■□□□□ 0.07
Ighv1-23A0A0A6YVW3 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Ighv1-23A0A0A6YVW3 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC15.48■□□□□ 0.07
Ighv1-23A0A0A6YVW3 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ighv1-23A0A0A6YVW3 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC15.48■□□□□ 0.07
Ighv1-23A0A0A6YVW3 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ighv1-23A0A0A6YVW3 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ighv1-23A0A0A6YVW3 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ighv1-23A0A0A6YVW3 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ighv1-23A0A0A6YVW3 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Ighv1-23A0A0A6YVW3 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
Ighv1-23A0A0A6YVW3 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ighv1-23A0A0A6YVW3 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ighv1-23A0A0A6YVW3 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC15.48■□□□□ 0.07
Ighv1-23A0A0A6YVW3 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
Ighv1-23A0A0A6YVW3 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC15.47■□□□□ 0.07
Ighv1-23A0A0A6YVW3 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Ighv1-23A0A0A6YVW3 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Ighv1-23A0A0A6YVW3 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Ighv1-23A0A0A6YVW3 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
Ighv1-23A0A0A6YVW3 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Ighv1-23A0A0A6YVW3 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Ighv1-23A0A0A6YVW3 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Ighv1-23A0A0A6YVW3 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Ighv1-23A0A0A6YVW3 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Ighv1-23A0A0A6YVW3 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Ighv1-23A0A0A6YVW3 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
Ighv1-23A0A0A6YVW3 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Ighv1-23A0A0A6YVW3 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
Ighv1-23A0A0A6YVW3 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC15.46■□□□□ 0.07
Ighv1-23A0A0A6YVW3 Gm15043-201ENSMUST00000118843 1543 ntBASIC15.46■□□□□ 0.07
Ighv1-23A0A0A6YVW3 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Ighv1-23A0A0A6YVW3 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
Ighv1-23A0A0A6YVW3 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ighv1-23A0A0A6YVW3 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ighv1-23A0A0A6YVW3 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ighv1-23A0A0A6YVW3 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
Ighv1-23A0A0A6YVW3 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Ighv1-23A0A0A6YVW3 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ighv1-23A0A0A6YVW3 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC15.45■□□□□ 0.06
Ighv1-23A0A0A6YVW3 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ighv1-23A0A0A6YVW3 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ighv1-23A0A0A6YVW3 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ighv1-23A0A0A6YVW3 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ighv1-23A0A0A6YVW3 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ighv1-23A0A0A6YVW3 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
Ighv1-23A0A0A6YVW3 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Ighv1-23A0A0A6YVW3 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Ighv1-23A0A0A6YVW3 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
Ighv1-23A0A0A6YVW3 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ighv1-23A0A0A6YVW3 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Ighv1-23A0A0A6YVW3 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ighv1-23A0A0A6YVW3 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Ighv1-23A0A0A6YVW3 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Ighv1-23A0A0A6YVW3 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ighv1-23A0A0A6YVW3 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ighv1-23A0A0A6YVW3 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ighv1-23A0A0A6YVW3 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ighv1-23A0A0A6YVW3 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Ighv1-23A0A0A6YVW3 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
Ighv1-23A0A0A6YVW3 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC15.43■□□□□ 0.06
Ighv1-23A0A0A6YVW3 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ighv1-23A0A0A6YVW3 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Ighv1-23A0A0A6YVW3 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ighv1-23A0A0A6YVW3 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ighv1-23A0A0A6YVW3 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ighv1-23A0A0A6YVW3 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ighv1-23A0A0A6YVW3 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ighv1-23A0A0A6YVW3 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
Ighv1-23A0A0A6YVW3 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ighv1-23A0A0A6YVW3 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms