Protein–RNA interactions for Protein: A0A075B6B4

Trav6-4, T cell receptor alpha variable 6-4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-4A0A075B6B4 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Trav6-4A0A075B6B4 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Trav6-4A0A075B6B4 Gm5812-201ENSMUST00000061073 957 ntBASIC16.11■□□□□ 0.17
Trav6-4A0A075B6B4 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav6-4A0A075B6B4 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Trav6-4A0A075B6B4 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
Trav6-4A0A075B6B4 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav6-4A0A075B6B4 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav6-4A0A075B6B4 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav6-4A0A075B6B4 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav6-4A0A075B6B4 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav6-4A0A075B6B4 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC16.1■□□□□ 0.17
Trav6-4A0A075B6B4 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC16.1■□□□□ 0.17
Trav6-4A0A075B6B4 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav6-4A0A075B6B4 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav6-4A0A075B6B4 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav6-4A0A075B6B4 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav6-4A0A075B6B4 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav6-4A0A075B6B4 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
Trav6-4A0A075B6B4 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav6-4A0A075B6B4 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav6-4A0A075B6B4 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC16.09■□□□□ 0.17
Trav6-4A0A075B6B4 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Trav6-4A0A075B6B4 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Trav6-4A0A075B6B4 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
Trav6-4A0A075B6B4 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav6-4A0A075B6B4 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav6-4A0A075B6B4 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav6-4A0A075B6B4 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav6-4A0A075B6B4 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav6-4A0A075B6B4 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC16.08■□□□□ 0.17
Trav6-4A0A075B6B4 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC16.08■□□□□ 0.17
Trav6-4A0A075B6B4 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trav6-4A0A075B6B4 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trav6-4A0A075B6B4 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC16.08■□□□□ 0.16
Trav6-4A0A075B6B4 Gm18755-201ENSMUST00000218030 1099 ntBASIC16.08■□□□□ 0.16
Trav6-4A0A075B6B4 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trav6-4A0A075B6B4 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trav6-4A0A075B6B4 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
Trav6-4A0A075B6B4 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trav6-4A0A075B6B4 Gm37415-201ENSMUST00000192265 2054 ntBASIC16.07■□□□□ 0.16
Trav6-4A0A075B6B4 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav6-4A0A075B6B4 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
Trav6-4A0A075B6B4 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC16.07■□□□□ 0.16
Trav6-4A0A075B6B4 Gm15546-201ENSMUST00000122095 826 ntBASIC16.07■□□□□ 0.16
Trav6-4A0A075B6B4 Gm15820-201ENSMUST00000201566 728 ntBASIC16.07■□□□□ 0.16
Trav6-4A0A075B6B4 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC16.07■□□□□ 0.16
Trav6-4A0A075B6B4 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav6-4A0A075B6B4 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Trav6-4A0A075B6B4 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Trav6-4A0A075B6B4 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC16.07■□□□□ 0.16
Trav6-4A0A075B6B4 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav6-4A0A075B6B4 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC16.07■□□□□ 0.16
Trav6-4A0A075B6B4 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav6-4A0A075B6B4 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav6-4A0A075B6B4 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav6-4A0A075B6B4 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav6-4A0A075B6B4 Gm5522-201ENSMUST00000189483 1242 ntBASIC16.06■□□□□ 0.16
Trav6-4A0A075B6B4 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC16.06■□□□□ 0.16
Trav6-4A0A075B6B4 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav6-4A0A075B6B4 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav6-4A0A075B6B4 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Trav6-4A0A075B6B4 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav6-4A0A075B6B4 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav6-4A0A075B6B4 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC16.05■□□□□ 0.16
Trav6-4A0A075B6B4 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav6-4A0A075B6B4 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav6-4A0A075B6B4 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC16.05■□□□□ 0.16
Trav6-4A0A075B6B4 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav6-4A0A075B6B4 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav6-4A0A075B6B4 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav6-4A0A075B6B4 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav6-4A0A075B6B4 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Trav6-4A0A075B6B4 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Trav6-4A0A075B6B4 Gm42501-201ENSMUST00000200220 1026 ntBASIC16.04■□□□□ 0.16
Trav6-4A0A075B6B4 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav6-4A0A075B6B4 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC16.04■□□□□ 0.16
Trav6-4A0A075B6B4 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
Trav6-4A0A075B6B4 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC16.03■□□□□ 0.16
Trav6-4A0A075B6B4 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav6-4A0A075B6B4 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Trav6-4A0A075B6B4 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Trav6-4A0A075B6B4 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav6-4A0A075B6B4 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC16.03■□□□□ 0.16
Trav6-4A0A075B6B4 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
Trav6-4A0A075B6B4 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Trav6-4A0A075B6B4 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC16.03■□□□□ 0.16
Trav6-4A0A075B6B4 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav6-4A0A075B6B4 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trav6-4A0A075B6B4 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trav6-4A0A075B6B4 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trav6-4A0A075B6B4 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Trav6-4A0A075B6B4 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC16.02■□□□□ 0.16
Trav6-4A0A075B6B4 Gm10399-202ENSMUST00000202768 748 ntBASIC16.02■□□□□ 0.16
Trav6-4A0A075B6B4 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC16.02■□□□□ 0.16
Trav6-4A0A075B6B4 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Trav6-4A0A075B6B4 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Trav6-4A0A075B6B4 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Trav6-4A0A075B6B4 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav6-4A0A075B6B4 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms