Protein–RNA interactions for Protein: A0A075B621

Trav6n-5, T cell receptor alpha variable 6N-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-5A0A075B621 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Trav6n-5A0A075B621 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav6n-5A0A075B621 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Trav6n-5A0A075B621 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav6n-5A0A075B621 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav6n-5A0A075B621 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Trav6n-5A0A075B621 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Trav6n-5A0A075B621 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC16.2■□□□□ 0.18
Trav6n-5A0A075B621 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Trav6n-5A0A075B621 Gm5913-201ENSMUST00000119397 1399 ntBASIC16.2■□□□□ 0.18
Trav6n-5A0A075B621 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav6n-5A0A075B621 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Trav6n-5A0A075B621 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav6n-5A0A075B621 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav6n-5A0A075B621 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Trav6n-5A0A075B621 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav6n-5A0A075B621 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav6n-5A0A075B621 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav6n-5A0A075B621 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav6n-5A0A075B621 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav6n-5A0A075B621 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Trav6n-5A0A075B621 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav6n-5A0A075B621 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav6n-5A0A075B621 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Trav6n-5A0A075B621 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav6n-5A0A075B621 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav6n-5A0A075B621 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav6n-5A0A075B621 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav6n-5A0A075B621 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav6n-5A0A075B621 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav6n-5A0A075B621 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav6n-5A0A075B621 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Trav6n-5A0A075B621 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav6n-5A0A075B621 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav6n-5A0A075B621 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav6n-5A0A075B621 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC16.17■□□□□ 0.18
Trav6n-5A0A075B621 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
Trav6n-5A0A075B621 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC16.17■□□□□ 0.18
Trav6n-5A0A075B621 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav6n-5A0A075B621 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav6n-5A0A075B621 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav6n-5A0A075B621 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav6n-5A0A075B621 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC16.16■□□□□ 0.18
Trav6n-5A0A075B621 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav6n-5A0A075B621 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Trav6n-5A0A075B621 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Trav6n-5A0A075B621 Mir3960-201ENSMUST00000198213 73 ntBASIC16.16■□□□□ 0.18
Trav6n-5A0A075B621 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav6n-5A0A075B621 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav6n-5A0A075B621 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Trav6n-5A0A075B621 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav6n-5A0A075B621 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Trav6n-5A0A075B621 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav6n-5A0A075B621 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav6n-5A0A075B621 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC16.15■□□□□ 0.18
Trav6n-5A0A075B621 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav6n-5A0A075B621 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Trav6n-5A0A075B621 AC154454.1-201ENSMUST00000225253 216 ntBASIC16.15■□□□□ 0.18
Trav6n-5A0A075B621 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Trav6n-5A0A075B621 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav6n-5A0A075B621 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav6n-5A0A075B621 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav6n-5A0A075B621 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Trav6n-5A0A075B621 AC152827.1-201ENSMUST00000221143 2189 ntBASIC16.14■□□□□ 0.17
Trav6n-5A0A075B621 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Trav6n-5A0A075B621 Golph3-202ENSMUST00000226517 2359 ntBASIC16.14■□□□□ 0.17
Trav6n-5A0A075B621 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trav6n-5A0A075B621 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav6n-5A0A075B621 Gm5131-201ENSMUST00000212776 1238 ntBASIC16.13■□□□□ 0.17
Trav6n-5A0A075B621 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav6n-5A0A075B621 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav6n-5A0A075B621 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav6n-5A0A075B621 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Trav6n-5A0A075B621 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav6n-5A0A075B621 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav6n-5A0A075B621 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav6n-5A0A075B621 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav6n-5A0A075B621 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav6n-5A0A075B621 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav6n-5A0A075B621 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav6n-5A0A075B621 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Trav6n-5A0A075B621 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav6n-5A0A075B621 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav6n-5A0A075B621 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Trav6n-5A0A075B621 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC16.11■□□□□ 0.17
Trav6n-5A0A075B621 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Trav6n-5A0A075B621 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Trav6n-5A0A075B621 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav6n-5A0A075B621 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC16.11■□□□□ 0.17
Trav6n-5A0A075B621 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav6n-5A0A075B621 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav6n-5A0A075B621 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav6n-5A0A075B621 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav6n-5A0A075B621 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav6n-5A0A075B621 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav6n-5A0A075B621 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Trav6n-5A0A075B621 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Trav6n-5A0A075B621 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav6n-5A0A075B621 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav6n-5A0A075B621 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 17.9 ms