Protein–RNA interactions for Protein: Q9R100

Cdh17, Cadherin-17, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh17Q9R100 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Cdh17Q9R100 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cdh17Q9R100 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cdh17Q9R100 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Cdh17Q9R100 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cdh17Q9R100 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cdh17Q9R100 AC158990.1-201ENSMUST00000221450 2016 ntBASIC20.53■□□□□ 0.88
Cdh17Q9R100 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC20.53■□□□□ 0.88
Cdh17Q9R100 Gm12366-201ENSMUST00000121722 873 ntBASIC20.53■□□□□ 0.88
Cdh17Q9R100 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC20.53■□□□□ 0.88
Cdh17Q9R100 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC20.53■□□□□ 0.88
Cdh17Q9R100 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Cdh17Q9R100 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC20.53■□□□□ 0.88
Cdh17Q9R100 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC20.53■□□□□ 0.88
Cdh17Q9R100 Gm5786-201ENSMUST00000085368 882 ntBASIC20.53■□□□□ 0.88
Cdh17Q9R100 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cdh17Q9R100 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC20.53■□□□□ 0.88
Cdh17Q9R100 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Cdh17Q9R100 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
Cdh17Q9R100 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Cdh17Q9R100 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
Cdh17Q9R100 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Cdh17Q9R100 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Cdh17Q9R100 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Cdh17Q9R100 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC20.52■□□□□ 0.88
Cdh17Q9R100 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Cdh17Q9R100 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC20.52■□□□□ 0.88
Cdh17Q9R100 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Cdh17Q9R100 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Cdh17Q9R100 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Cdh17Q9R100 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cdh17Q9R100 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cdh17Q9R100 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cdh17Q9R100 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Cdh17Q9R100 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cdh17Q9R100 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC20.5■□□□□ 0.87
Cdh17Q9R100 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC20.5■□□□□ 0.87
Cdh17Q9R100 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cdh17Q9R100 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cdh17Q9R100 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cdh17Q9R100 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC20.5■□□□□ 0.87
Cdh17Q9R100 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cdh17Q9R100 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
Cdh17Q9R100 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cdh17Q9R100 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cdh17Q9R100 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cdh17Q9R100 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Cdh17Q9R100 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Cdh17Q9R100 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Cdh17Q9R100 Mir6538-201ENSMUST00000183713 110 ntBASIC20.49■□□□□ 0.87
Cdh17Q9R100 AC116713.1-201ENSMUST00000215074 430 ntBASIC20.49■□□□□ 0.87
Cdh17Q9R100 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cdh17Q9R100 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cdh17Q9R100 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Cdh17Q9R100 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cdh17Q9R100 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Cdh17Q9R100 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cdh17Q9R100 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cdh17Q9R100 Gm10420-201ENSMUST00000121713 882 ntBASIC20.48■□□□□ 0.87
Cdh17Q9R100 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Cdh17Q9R100 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cdh17Q9R100 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cdh17Q9R100 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cdh17Q9R100 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cdh17Q9R100 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Cdh17Q9R100 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cdh17Q9R100 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Cdh17Q9R100 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cdh17Q9R100 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cdh17Q9R100 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cdh17Q9R100 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cdh17Q9R100 Gm44949-201ENSMUST00000206423 1450 ntBASIC20.46■□□□□ 0.87
Cdh17Q9R100 Hsf1-207ENSMUST00000228371 2102 ntBASIC20.46■□□□□ 0.87
Cdh17Q9R100 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cdh17Q9R100 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cdh17Q9R100 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cdh17Q9R100 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cdh17Q9R100 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Cdh17Q9R100 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Cdh17Q9R100 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Cdh17Q9R100 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Cdh17Q9R100 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC20.45■□□□□ 0.86
Cdh17Q9R100 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Cdh17Q9R100 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Cdh17Q9R100 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Cdh17Q9R100 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
Cdh17Q9R100 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Cdh17Q9R100 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC20.44■□□□□ 0.86
Cdh17Q9R100 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
Cdh17Q9R100 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Cdh17Q9R100 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Cdh17Q9R100 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Cdh17Q9R100 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Cdh17Q9R100 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
Cdh17Q9R100 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cdh17Q9R100 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC20.41■□□□□ 0.86
Cdh17Q9R100 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cdh17Q9R100 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Cdh17Q9R100 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cdh17Q9R100 Gm20634-201ENSMUST00000090779 2956 ntBASIC20.4■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 70.3 ms