Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC23.97■■□□□ 1.43
Trim11Q99PQ2 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Trim11Q99PQ2 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
Trim11Q99PQ2 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC23.97■■□□□ 1.43
Trim11Q99PQ2 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC23.96■■□□□ 1.43
Trim11Q99PQ2 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC23.96■■□□□ 1.43
Trim11Q99PQ2 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
Trim11Q99PQ2 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Trim11Q99PQ2 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC23.96■■□□□ 1.43
Trim11Q99PQ2 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC23.96■■□□□ 1.43
Trim11Q99PQ2 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Trim11Q99PQ2 Cap2-205ENSMUST00000225824 1634 ntBASIC23.95■■□□□ 1.43
Trim11Q99PQ2 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC23.95■■□□□ 1.43
Trim11Q99PQ2 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC23.95■■□□□ 1.43
Trim11Q99PQ2 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
Trim11Q99PQ2 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC23.95■■□□□ 1.42
Trim11Q99PQ2 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Trim11Q99PQ2 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
Trim11Q99PQ2 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC23.95■■□□□ 1.42
Trim11Q99PQ2 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
Trim11Q99PQ2 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Trim11Q99PQ2 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC23.94■■□□□ 1.42
Trim11Q99PQ2 AC116713.1-201ENSMUST00000215074 430 ntBASIC23.94■■□□□ 1.42
Trim11Q99PQ2 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC23.94■■□□□ 1.42
Trim11Q99PQ2 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
Trim11Q99PQ2 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Trim11Q99PQ2 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Trim11Q99PQ2 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
Trim11Q99PQ2 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Trim11Q99PQ2 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC23.93■■□□□ 1.42
Trim11Q99PQ2 AC164883.3-201ENSMUST00000227396 1774 ntBASIC23.93■■□□□ 1.42
Trim11Q99PQ2 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC23.93■■□□□ 1.42
Trim11Q99PQ2 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Trim11Q99PQ2 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC23.93■■□□□ 1.42
Trim11Q99PQ2 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC23.93■■□□□ 1.42
Trim11Q99PQ2 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Trim11Q99PQ2 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC23.93■■□□□ 1.42
Trim11Q99PQ2 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC23.92■■□□□ 1.42
Trim11Q99PQ2 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC23.92■■□□□ 1.42
Trim11Q99PQ2 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC23.92■■□□□ 1.42
Trim11Q99PQ2 AC158990.1-201ENSMUST00000221450 2016 ntBASIC23.92■■□□□ 1.42
Trim11Q99PQ2 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC23.91■■□□□ 1.42
Trim11Q99PQ2 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC23.91■■□□□ 1.42
Trim11Q99PQ2 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Trim11Q99PQ2 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC23.91■■□□□ 1.42
Trim11Q99PQ2 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
Trim11Q99PQ2 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
Trim11Q99PQ2 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Trim11Q99PQ2 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC23.9■■□□□ 1.42
Trim11Q99PQ2 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC23.9■■□□□ 1.42
Trim11Q99PQ2 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC23.9■■□□□ 1.42
Trim11Q99PQ2 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Trim11Q99PQ2 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC23.89■■□□□ 1.42
Trim11Q99PQ2 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC23.89■■□□□ 1.42
Trim11Q99PQ2 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
Trim11Q99PQ2 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC23.89■■□□□ 1.41
Trim11Q99PQ2 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC23.88■■□□□ 1.41
Trim11Q99PQ2 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
Trim11Q99PQ2 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Trim11Q99PQ2 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC23.88■■□□□ 1.41
Trim11Q99PQ2 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Trim11Q99PQ2 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC23.87■■□□□ 1.41
Trim11Q99PQ2 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
Trim11Q99PQ2 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC23.87■■□□□ 1.41
Trim11Q99PQ2 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC23.87■■□□□ 1.41
Trim11Q99PQ2 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
Trim11Q99PQ2 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
Trim11Q99PQ2 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC23.86■■□□□ 1.41
Trim11Q99PQ2 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Trim11Q99PQ2 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Trim11Q99PQ2 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Trim11Q99PQ2 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC23.86■■□□□ 1.41
Trim11Q99PQ2 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC23.86■■□□□ 1.41
Trim11Q99PQ2 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC23.85■■□□□ 1.41
Trim11Q99PQ2 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC23.85■■□□□ 1.41
Trim11Q99PQ2 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
Trim11Q99PQ2 Gm11847-201ENSMUST00000125165 1119 ntBASIC23.85■■□□□ 1.41
Trim11Q99PQ2 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC23.85■■□□□ 1.41
Trim11Q99PQ2 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
Trim11Q99PQ2 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Trim11Q99PQ2 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
Trim11Q99PQ2 Gm28536-201ENSMUST00000190971 1317 ntBASIC23.84■■□□□ 1.41
Trim11Q99PQ2 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Trim11Q99PQ2 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Trim11Q99PQ2 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Trim11Q99PQ2 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC23.84■■□□□ 1.41
Trim11Q99PQ2 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
Trim11Q99PQ2 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC23.84■■□□□ 1.41
Trim11Q99PQ2 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Trim11Q99PQ2 Gm38160-201ENSMUST00000193090 2499 ntBASIC23.84■■□□□ 1.41
Trim11Q99PQ2 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC23.83■■□□□ 1.41
Trim11Q99PQ2 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC23.83■■□□□ 1.41
Trim11Q99PQ2 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
Trim11Q99PQ2 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC23.83■■□□□ 1.41
Trim11Q99PQ2 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC23.83■■□□□ 1.41
Trim11Q99PQ2 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC23.83■■□□□ 1.41
Trim11Q99PQ2 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC23.83■■□□□ 1.41
Trim11Q99PQ2 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Trim11Q99PQ2 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Trim11Q99PQ2 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms