Protein–RNA interactions for Protein: Q99J95

Cdk9, Cyclin-dependent kinase 9, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk9Q99J95 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Cdk9Q99J95 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC21.06■□□□□ 0.96
Cdk9Q99J95 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC21.06■□□□□ 0.96
Cdk9Q99J95 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Cdk9Q99J95 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
Cdk9Q99J95 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Cdk9Q99J95 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC21.06■□□□□ 0.96
Cdk9Q99J95 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
Cdk9Q99J95 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Cdk9Q99J95 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Cdk9Q99J95 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Cdk9Q99J95 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
Cdk9Q99J95 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
Cdk9Q99J95 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC21.05■□□□□ 0.96
Cdk9Q99J95 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
Cdk9Q99J95 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
Cdk9Q99J95 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC21.05■□□□□ 0.96
Cdk9Q99J95 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Cdk9Q99J95 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Cdk9Q99J95 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
Cdk9Q99J95 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
Cdk9Q99J95 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Cdk9Q99J95 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Cdk9Q99J95 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Cdk9Q99J95 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Cdk9Q99J95 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
Cdk9Q99J95 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Cdk9Q99J95 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Cdk9Q99J95 Golph3-202ENSMUST00000226517 2359 ntBASIC21.03■□□□□ 0.96
Cdk9Q99J95 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC21.03■□□□□ 0.96
Cdk9Q99J95 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Cdk9Q99J95 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Cdk9Q99J95 Gm6311-201ENSMUST00000073790 878 ntBASIC21.02■□□□□ 0.96
Cdk9Q99J95 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Cdk9Q99J95 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
Cdk9Q99J95 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Cdk9Q99J95 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Cdk9Q99J95 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
Cdk9Q99J95 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Cdk9Q99J95 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Cdk9Q99J95 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
Cdk9Q99J95 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Cdk9Q99J95 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC21.01■□□□□ 0.95
Cdk9Q99J95 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Cdk9Q99J95 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC21■□□□□ 0.95
Cdk9Q99J95 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Cdk9Q99J95 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC21■□□□□ 0.95
Cdk9Q99J95 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
Cdk9Q99J95 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC21■□□□□ 0.95
Cdk9Q99J95 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
Cdk9Q99J95 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Cdk9Q99J95 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC21■□□□□ 0.95
Cdk9Q99J95 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Cdk9Q99J95 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC21■□□□□ 0.95
Cdk9Q99J95 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC21■□□□□ 0.95
Cdk9Q99J95 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC20.99■□□□□ 0.95
Cdk9Q99J95 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Cdk9Q99J95 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Cdk9Q99J95 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
Cdk9Q99J95 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Cdk9Q99J95 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Cdk9Q99J95 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Cdk9Q99J95 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Cdk9Q99J95 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC20.98■□□□□ 0.95
Cdk9Q99J95 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC20.98■□□□□ 0.95
Cdk9Q99J95 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
Cdk9Q99J95 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Cdk9Q99J95 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Cdk9Q99J95 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Cdk9Q99J95 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC20.98■□□□□ 0.95
Cdk9Q99J95 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
Cdk9Q99J95 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Cdk9Q99J95 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Cdk9Q99J95 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC20.97■□□□□ 0.95
Cdk9Q99J95 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Cdk9Q99J95 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Cdk9Q99J95 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Cdk9Q99J95 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Cdk9Q99J95 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC20.96■□□□□ 0.95
Cdk9Q99J95 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Cdk9Q99J95 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cdk9Q99J95 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Cdk9Q99J95 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC20.96■□□□□ 0.95
Cdk9Q99J95 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC20.96■□□□□ 0.95
Cdk9Q99J95 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
Cdk9Q99J95 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cdk9Q99J95 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
Cdk9Q99J95 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Cdk9Q99J95 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC20.95■□□□□ 0.95
Cdk9Q99J95 Kdm3b-204ENSMUST00000224715 2032 ntBASIC20.95■□□□□ 0.94
Cdk9Q99J95 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Cdk9Q99J95 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC20.95■□□□□ 0.94
Cdk9Q99J95 Pkd1-207ENSMUST00000228550 1050 ntBASIC20.95■□□□□ 0.94
Cdk9Q99J95 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Cdk9Q99J95 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
Cdk9Q99J95 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Cdk9Q99J95 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC20.94■□□□□ 0.94
Cdk9Q99J95 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cdk9Q99J95 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cdk9Q99J95 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 130.5 ms