Protein–RNA interactions for Protein: Q91XX1

Pcdhgc3, Protocadherin gamma C3, mousemouse

Predictions only

Length 934 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgc3Q91XX1 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Pcdhgc3Q91XX1 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Pcdhgc3Q91XX1 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Pcdhgc3Q91XX1 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Pcdhgc3Q91XX1 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Pcdhgc3Q91XX1 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC19.81■□□□□ 0.76
Pcdhgc3Q91XX1 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Pcdhgc3Q91XX1 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Pcdhgc3Q91XX1 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
Pcdhgc3Q91XX1 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Pcdhgc3Q91XX1 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
Pcdhgc3Q91XX1 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Pcdhgc3Q91XX1 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC19.8■□□□□ 0.76
Pcdhgc3Q91XX1 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Pcdhgc3Q91XX1 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC19.79■□□□□ 0.76
Pcdhgc3Q91XX1 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pcdhgc3Q91XX1 Snhg20-203ENSMUST00000182811 2153 ntBASIC19.79■□□□□ 0.76
Pcdhgc3Q91XX1 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pcdhgc3Q91XX1 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC19.79■□□□□ 0.76
Pcdhgc3Q91XX1 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pcdhgc3Q91XX1 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pcdhgc3Q91XX1 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pcdhgc3Q91XX1 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Pcdhgc3Q91XX1 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Pcdhgc3Q91XX1 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Pcdhgc3Q91XX1 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Pcdhgc3Q91XX1 Terc-201ENSMUST00000082862 423 ntBASIC19.78■□□□□ 0.76
Pcdhgc3Q91XX1 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC19.78■□□□□ 0.76
Pcdhgc3Q91XX1 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Pcdhgc3Q91XX1 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Pcdhgc3Q91XX1 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
Pcdhgc3Q91XX1 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC19.77■□□□□ 0.76
Pcdhgc3Q91XX1 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Pcdhgc3Q91XX1 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Pcdhgc3Q91XX1 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.75
Pcdhgc3Q91XX1 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.75
Pcdhgc3Q91XX1 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Pcdhgc3Q91XX1 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Pcdhgc3Q91XX1 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Pcdhgc3Q91XX1 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
Pcdhgc3Q91XX1 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Pcdhgc3Q91XX1 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdhgc3Q91XX1 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Pcdhgc3Q91XX1 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdhgc3Q91XX1 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Pcdhgc3Q91XX1 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC19.75■□□□□ 0.75
Pcdhgc3Q91XX1 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pcdhgc3Q91XX1 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pcdhgc3Q91XX1 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pcdhgc3Q91XX1 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pcdhgc3Q91XX1 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pcdhgc3Q91XX1 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pcdhgc3Q91XX1 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pcdhgc3Q91XX1 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pcdhgc3Q91XX1 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Pcdhgc3Q91XX1 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Pcdhgc3Q91XX1 Golph3-202ENSMUST00000226517 2359 ntBASIC19.73■□□□□ 0.75
Pcdhgc3Q91XX1 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdhgc3Q91XX1 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdhgc3Q91XX1 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdhgc3Q91XX1 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdhgc3Q91XX1 Mir3960-201ENSMUST00000198213 73 ntBASIC19.73■□□□□ 0.75
Pcdhgc3Q91XX1 AC154454.1-201ENSMUST00000225253 216 ntBASIC19.73■□□□□ 0.75
Pcdhgc3Q91XX1 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Pcdhgc3Q91XX1 Gm12818-201ENSMUST00000117562 1349 ntBASIC19.73■□□□□ 0.75
Pcdhgc3Q91XX1 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC19.72■□□□□ 0.75
Pcdhgc3Q91XX1 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Pcdhgc3Q91XX1 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Pcdhgc3Q91XX1 AC167019.3-201ENSMUST00000228225 1266 ntBASIC19.72■□□□□ 0.75
Pcdhgc3Q91XX1 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Pcdhgc3Q91XX1 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Pcdhgc3Q91XX1 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pcdhgc3Q91XX1 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pcdhgc3Q91XX1 AC164883.3-201ENSMUST00000227396 1774 ntBASIC19.71■□□□□ 0.75
Pcdhgc3Q91XX1 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pcdhgc3Q91XX1 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pcdhgc3Q91XX1 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pcdhgc3Q91XX1 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Pcdhgc3Q91XX1 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Pcdhgc3Q91XX1 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Pcdhgc3Q91XX1 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Pcdhgc3Q91XX1 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Pcdhgc3Q91XX1 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC19.7■□□□□ 0.74
Pcdhgc3Q91XX1 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pcdhgc3Q91XX1 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pcdhgc3Q91XX1 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC19.7■□□□□ 0.74
Pcdhgc3Q91XX1 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pcdhgc3Q91XX1 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Pcdhgc3Q91XX1 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Pcdhgc3Q91XX1 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Pcdhgc3Q91XX1 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Pcdhgc3Q91XX1 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Pcdhgc3Q91XX1 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Pcdhgc3Q91XX1 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pcdhgc3Q91XX1 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pcdhgc3Q91XX1 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pcdhgc3Q91XX1 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Pcdhgc3Q91XX1 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Pcdhgc3Q91XX1 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pcdhgc3Q91XX1 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 15.4 ms