Protein–RNA interactions for Protein: Q91VA1

Slc44a4, Choline transporter-like protein 4, mousemouse

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc44a4Q91VA1 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
Slc44a4Q91VA1 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
Slc44a4Q91VA1 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
Slc44a4Q91VA1 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC25.15■■□□□ 1.62
Slc44a4Q91VA1 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
Slc44a4Q91VA1 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
Slc44a4Q91VA1 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
Slc44a4Q91VA1 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
Slc44a4Q91VA1 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC25.14■■□□□ 1.62
Slc44a4Q91VA1 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC25.14■■□□□ 1.61
Slc44a4Q91VA1 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC25.14■■□□□ 1.61
Slc44a4Q91VA1 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
Slc44a4Q91VA1 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC25.13■■□□□ 1.61
Slc44a4Q91VA1 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
Slc44a4Q91VA1 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
Slc44a4Q91VA1 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
Slc44a4Q91VA1 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
Slc44a4Q91VA1 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
Slc44a4Q91VA1 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
Slc44a4Q91VA1 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
Slc44a4Q91VA1 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
Slc44a4Q91VA1 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
Slc44a4Q91VA1 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC25.13■■□□□ 1.61
Slc44a4Q91VA1 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Slc44a4Q91VA1 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
Slc44a4Q91VA1 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC25.12■■□□□ 1.61
Slc44a4Q91VA1 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
Slc44a4Q91VA1 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC25.11■■□□□ 1.61
Slc44a4Q91VA1 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
Slc44a4Q91VA1 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
Slc44a4Q91VA1 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC25.11■■□□□ 1.61
Slc44a4Q91VA1 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
Slc44a4Q91VA1 Gm9207-201ENSMUST00000198773 1115 ntBASIC25.11■■□□□ 1.61
Slc44a4Q91VA1 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
Slc44a4Q91VA1 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
Slc44a4Q91VA1 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC25.1■■□□□ 1.61
Slc44a4Q91VA1 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC25.1■■□□□ 1.61
Slc44a4Q91VA1 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC25.1■■□□□ 1.61
Slc44a4Q91VA1 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
Slc44a4Q91VA1 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
Slc44a4Q91VA1 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC25.09■■□□□ 1.61
Slc44a4Q91VA1 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
Slc44a4Q91VA1 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC25.09■■□□□ 1.61
Slc44a4Q91VA1 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
Slc44a4Q91VA1 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
Slc44a4Q91VA1 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC25.09■■□□□ 1.61
Slc44a4Q91VA1 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC25.09■■□□□ 1.61
Slc44a4Q91VA1 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC25.09■■□□□ 1.61
Slc44a4Q91VA1 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC25.08■■□□□ 1.61
Slc44a4Q91VA1 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
Slc44a4Q91VA1 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
Slc44a4Q91VA1 AC116713.1-201ENSMUST00000215074 430 ntBASIC25.08■■□□□ 1.61
Slc44a4Q91VA1 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC25.08■■□□□ 1.61
Slc44a4Q91VA1 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC25.08■■□□□ 1.61
Slc44a4Q91VA1 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.6
Slc44a4Q91VA1 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
Slc44a4Q91VA1 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
Slc44a4Q91VA1 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC25.07■■□□□ 1.6
Slc44a4Q91VA1 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC25.07■■□□□ 1.6
Slc44a4Q91VA1 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
Slc44a4Q91VA1 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC25.07■■□□□ 1.6
Slc44a4Q91VA1 Gm9870-201ENSMUST00000063874 645 ntBASIC25.07■■□□□ 1.6
Slc44a4Q91VA1 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC25.07■■□□□ 1.6
Slc44a4Q91VA1 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC25.07■■□□□ 1.6
Slc44a4Q91VA1 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
Slc44a4Q91VA1 Il17rd-202ENSMUST00000223942 2186 ntBASIC25.07■■□□□ 1.6
Slc44a4Q91VA1 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
Slc44a4Q91VA1 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
Slc44a4Q91VA1 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC25.06■■□□□ 1.6
Slc44a4Q91VA1 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC25.06■■□□□ 1.6
Slc44a4Q91VA1 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC25.06■■□□□ 1.6
Slc44a4Q91VA1 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC25.06■■□□□ 1.6
Slc44a4Q91VA1 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Slc44a4Q91VA1 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
Slc44a4Q91VA1 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC25.05■■□□□ 1.6
Slc44a4Q91VA1 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC25.05■■□□□ 1.6
Slc44a4Q91VA1 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Slc44a4Q91VA1 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC25.04■■□□□ 1.6
Slc44a4Q91VA1 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC25.04■■□□□ 1.6
Slc44a4Q91VA1 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC25.04■■□□□ 1.6
Slc44a4Q91VA1 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
Slc44a4Q91VA1 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
Slc44a4Q91VA1 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Slc44a4Q91VA1 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
Slc44a4Q91VA1 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC25.03■■□□□ 1.6
Slc44a4Q91VA1 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC25.03■■□□□ 1.6
Slc44a4Q91VA1 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC25.02■■□□□ 1.6
Slc44a4Q91VA1 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Slc44a4Q91VA1 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC25.02■■□□□ 1.6
Slc44a4Q91VA1 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC25.02■■□□□ 1.6
Slc44a4Q91VA1 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
Slc44a4Q91VA1 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC25.01■■□□□ 1.59
Slc44a4Q91VA1 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
Slc44a4Q91VA1 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC25■■□□□ 1.59
Slc44a4Q91VA1 Kdm3b-204ENSMUST00000224715 2032 ntBASIC25■■□□□ 1.59
Slc44a4Q91VA1 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC25■■□□□ 1.59
Slc44a4Q91VA1 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC25■■□□□ 1.59
Slc44a4Q91VA1 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC25■■□□□ 1.59
Slc44a4Q91VA1 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC25■■□□□ 1.59
Slc44a4Q91VA1 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC25■■□□□ 1.59
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms