Protein–RNA interactions for Protein: Q8VDB9

Slc6a20a, Sodium- and chloride-dependent transporter XTRP3A, mousemouse

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a20aQ8VDB9 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Slc6a20aQ8VDB9 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Slc6a20aQ8VDB9 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
Slc6a20aQ8VDB9 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.91
Slc6a20aQ8VDB9 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
Slc6a20aQ8VDB9 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Slc6a20aQ8VDB9 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC20.76■□□□□ 0.91
Slc6a20aQ8VDB9 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Slc6a20aQ8VDB9 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Slc6a20aQ8VDB9 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Slc6a20aQ8VDB9 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Slc6a20aQ8VDB9 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Slc6a20aQ8VDB9 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Slc6a20aQ8VDB9 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Slc6a20aQ8VDB9 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Slc6a20aQ8VDB9 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Slc6a20aQ8VDB9 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Slc6a20aQ8VDB9 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Slc6a20aQ8VDB9 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Slc6a20aQ8VDB9 Gm38160-201ENSMUST00000193090 2499 ntBASIC20.75■□□□□ 0.91
Slc6a20aQ8VDB9 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC20.74■□□□□ 0.91
Slc6a20aQ8VDB9 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Slc6a20aQ8VDB9 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Slc6a20aQ8VDB9 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Slc6a20aQ8VDB9 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Slc6a20aQ8VDB9 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Slc6a20aQ8VDB9 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Slc6a20aQ8VDB9 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Slc6a20aQ8VDB9 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Slc6a20aQ8VDB9 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC20.73■□□□□ 0.91
Slc6a20aQ8VDB9 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Slc6a20aQ8VDB9 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Slc6a20aQ8VDB9 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Slc6a20aQ8VDB9 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Slc6a20aQ8VDB9 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Slc6a20aQ8VDB9 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Slc6a20aQ8VDB9 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
Slc6a20aQ8VDB9 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
Slc6a20aQ8VDB9 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Slc6a20aQ8VDB9 AC164883.3-201ENSMUST00000227396 1774 ntBASIC20.72■□□□□ 0.91
Slc6a20aQ8VDB9 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC20.71■□□□□ 0.91
Slc6a20aQ8VDB9 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC20.71■□□□□ 0.91
Slc6a20aQ8VDB9 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Slc6a20aQ8VDB9 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Slc6a20aQ8VDB9 Gm28536-201ENSMUST00000190971 1317 ntBASIC20.71■□□□□ 0.91
Slc6a20aQ8VDB9 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.91
Slc6a20aQ8VDB9 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Slc6a20aQ8VDB9 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Slc6a20aQ8VDB9 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC20.7■□□□□ 0.9
Slc6a20aQ8VDB9 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC20.7■□□□□ 0.9
Slc6a20aQ8VDB9 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Slc6a20aQ8VDB9 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Slc6a20aQ8VDB9 Nsd1-203ENSMUST00000224156 1149 ntBASIC20.7■□□□□ 0.9
Slc6a20aQ8VDB9 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Slc6a20aQ8VDB9 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Slc6a20aQ8VDB9 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC20.69■□□□□ 0.9
Slc6a20aQ8VDB9 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Slc6a20aQ8VDB9 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Slc6a20aQ8VDB9 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Slc6a20aQ8VDB9 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC20.69■□□□□ 0.9
Slc6a20aQ8VDB9 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Slc6a20aQ8VDB9 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Slc6a20aQ8VDB9 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Slc6a20aQ8VDB9 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Slc6a20aQ8VDB9 Gm11847-201ENSMUST00000125165 1119 ntBASIC20.68■□□□□ 0.9
Slc6a20aQ8VDB9 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Slc6a20aQ8VDB9 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC20.68■□□□□ 0.9
Slc6a20aQ8VDB9 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Slc6a20aQ8VDB9 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Slc6a20aQ8VDB9 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC20.67■□□□□ 0.9
Slc6a20aQ8VDB9 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Slc6a20aQ8VDB9 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC20.67■□□□□ 0.9
Slc6a20aQ8VDB9 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Slc6a20aQ8VDB9 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC20.67■□□□□ 0.9
Slc6a20aQ8VDB9 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Slc6a20aQ8VDB9 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Slc6a20aQ8VDB9 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Slc6a20aQ8VDB9 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Slc6a20aQ8VDB9 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Slc6a20aQ8VDB9 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Slc6a20aQ8VDB9 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Slc6a20aQ8VDB9 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Slc6a20aQ8VDB9 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC20.66■□□□□ 0.9
Slc6a20aQ8VDB9 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC20.66■□□□□ 0.9
Slc6a20aQ8VDB9 AC116713.1-201ENSMUST00000215074 430 ntBASIC20.66■□□□□ 0.9
Slc6a20aQ8VDB9 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Slc6a20aQ8VDB9 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Slc6a20aQ8VDB9 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Slc6a20aQ8VDB9 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Slc6a20aQ8VDB9 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Slc6a20aQ8VDB9 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Slc6a20aQ8VDB9 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Slc6a20aQ8VDB9 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Slc6a20aQ8VDB9 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Slc6a20aQ8VDB9 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Slc6a20aQ8VDB9 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Slc6a20aQ8VDB9 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Slc6a20aQ8VDB9 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Slc6a20aQ8VDB9 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC20.65■□□□□ 0.9
Slc6a20aQ8VDB9 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms