Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
Cchcr1Q8K2I2 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
Cchcr1Q8K2I2 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC24.89■■□□□ 1.58
Cchcr1Q8K2I2 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC24.89■■□□□ 1.58
Cchcr1Q8K2I2 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
Cchcr1Q8K2I2 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC24.88■■□□□ 1.57
Cchcr1Q8K2I2 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC24.88■■□□□ 1.57
Cchcr1Q8K2I2 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
Cchcr1Q8K2I2 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC24.88■■□□□ 1.57
Cchcr1Q8K2I2 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
Cchcr1Q8K2I2 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
Cchcr1Q8K2I2 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
Cchcr1Q8K2I2 Gm43006-201ENSMUST00000197702 1602 ntBASIC24.87■■□□□ 1.57
Cchcr1Q8K2I2 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC24.87■■□□□ 1.57
Cchcr1Q8K2I2 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
Cchcr1Q8K2I2 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC24.87■■□□□ 1.57
Cchcr1Q8K2I2 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
Cchcr1Q8K2I2 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC24.87■■□□□ 1.57
Cchcr1Q8K2I2 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC24.87■■□□□ 1.57
Cchcr1Q8K2I2 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC24.87■■□□□ 1.57
Cchcr1Q8K2I2 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
Cchcr1Q8K2I2 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
Cchcr1Q8K2I2 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC24.86■■□□□ 1.57
Cchcr1Q8K2I2 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC24.86■■□□□ 1.57
Cchcr1Q8K2I2 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
Cchcr1Q8K2I2 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC24.86■■□□□ 1.57
Cchcr1Q8K2I2 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC24.86■■□□□ 1.57
Cchcr1Q8K2I2 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC24.86■■□□□ 1.57
Cchcr1Q8K2I2 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
Cchcr1Q8K2I2 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
Cchcr1Q8K2I2 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
Cchcr1Q8K2I2 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC24.85■■□□□ 1.57
Cchcr1Q8K2I2 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
Cchcr1Q8K2I2 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC24.85■■□□□ 1.57
Cchcr1Q8K2I2 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC24.85■■□□□ 1.57
Cchcr1Q8K2I2 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC24.85■■□□□ 1.57
Cchcr1Q8K2I2 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC24.84■■□□□ 1.57
Cchcr1Q8K2I2 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
Cchcr1Q8K2I2 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
Cchcr1Q8K2I2 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC24.83■■□□□ 1.57
Cchcr1Q8K2I2 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC24.83■■□□□ 1.57
Cchcr1Q8K2I2 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
Cchcr1Q8K2I2 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC24.83■■□□□ 1.57
Cchcr1Q8K2I2 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC24.83■■□□□ 1.57
Cchcr1Q8K2I2 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
Cchcr1Q8K2I2 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC24.83■■□□□ 1.57
Cchcr1Q8K2I2 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC24.83■■□□□ 1.56
Cchcr1Q8K2I2 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC24.83■■□□□ 1.56
Cchcr1Q8K2I2 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
Cchcr1Q8K2I2 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
Cchcr1Q8K2I2 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC24.82■■□□□ 1.56
Cchcr1Q8K2I2 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
Cchcr1Q8K2I2 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
Cchcr1Q8K2I2 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC24.82■■□□□ 1.56
Cchcr1Q8K2I2 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC24.81■■□□□ 1.56
Cchcr1Q8K2I2 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC24.81■■□□□ 1.56
Cchcr1Q8K2I2 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
Cchcr1Q8K2I2 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC24.81■■□□□ 1.56
Cchcr1Q8K2I2 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
Cchcr1Q8K2I2 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC24.81■■□□□ 1.56
Cchcr1Q8K2I2 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
Cchcr1Q8K2I2 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC24.8■■□□□ 1.56
Cchcr1Q8K2I2 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC24.8■■□□□ 1.56
Cchcr1Q8K2I2 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC24.8■■□□□ 1.56
Cchcr1Q8K2I2 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
Cchcr1Q8K2I2 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
Cchcr1Q8K2I2 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
Cchcr1Q8K2I2 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
Cchcr1Q8K2I2 AC158990.1-201ENSMUST00000221450 2016 ntBASIC24.79■■□□□ 1.56
Cchcr1Q8K2I2 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
Cchcr1Q8K2I2 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
Cchcr1Q8K2I2 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC24.79■■□□□ 1.56
Cchcr1Q8K2I2 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC24.79■■□□□ 1.56
Cchcr1Q8K2I2 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC24.78■■□□□ 1.56
Cchcr1Q8K2I2 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC24.78■■□□□ 1.56
Cchcr1Q8K2I2 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC24.78■■□□□ 1.56
Cchcr1Q8K2I2 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC24.78■■□□□ 1.56
Cchcr1Q8K2I2 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC24.78■■□□□ 1.56
Cchcr1Q8K2I2 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
Cchcr1Q8K2I2 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
Cchcr1Q8K2I2 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC24.77■■□□□ 1.56
Cchcr1Q8K2I2 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
Cchcr1Q8K2I2 Gm5067-201ENSMUST00000170449 1009 ntBASIC24.76■■□□□ 1.55
Cchcr1Q8K2I2 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
Cchcr1Q8K2I2 Kdm3b-204ENSMUST00000224715 2032 ntBASIC24.76■■□□□ 1.55
Cchcr1Q8K2I2 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
Cchcr1Q8K2I2 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
Cchcr1Q8K2I2 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
Cchcr1Q8K2I2 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
Cchcr1Q8K2I2 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC24.75■■□□□ 1.55
Cchcr1Q8K2I2 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
Cchcr1Q8K2I2 Gm44949-201ENSMUST00000206423 1450 ntBASIC24.75■■□□□ 1.55
Cchcr1Q8K2I2 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
Cchcr1Q8K2I2 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
Cchcr1Q8K2I2 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC24.74■■□□□ 1.55
Cchcr1Q8K2I2 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
Cchcr1Q8K2I2 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
Cchcr1Q8K2I2 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
Cchcr1Q8K2I2 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
Cchcr1Q8K2I2 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC24.73■■□□□ 1.55
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms