Protein–RNA interactions for Protein: Q8CC84

Lysmd4, LysM and putative peptidoglycan-binding domain-containing protein 4, mousemouse

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd4Q8CC84 Snhg20-203ENSMUST00000182811 2153 ntBASIC18.86■□□□□ 0.61
Lysmd4Q8CC84 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Lysmd4Q8CC84 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Lysmd4Q8CC84 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC18.86■□□□□ 0.61
Lysmd4Q8CC84 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Lysmd4Q8CC84 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC18.86■□□□□ 0.61
Lysmd4Q8CC84 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Lysmd4Q8CC84 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Lysmd4Q8CC84 Gm44949-201ENSMUST00000206423 1450 ntBASIC18.85■□□□□ 0.61
Lysmd4Q8CC84 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Lysmd4Q8CC84 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Lysmd4Q8CC84 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Lysmd4Q8CC84 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC18.85■□□□□ 0.61
Lysmd4Q8CC84 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Lysmd4Q8CC84 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Lysmd4Q8CC84 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Lysmd4Q8CC84 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC18.85■□□□□ 0.61
Lysmd4Q8CC84 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Lysmd4Q8CC84 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Lysmd4Q8CC84 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Lysmd4Q8CC84 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Lysmd4Q8CC84 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC18.84■□□□□ 0.61
Lysmd4Q8CC84 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Lysmd4Q8CC84 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Lysmd4Q8CC84 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Lysmd4Q8CC84 Gm4430-201ENSMUST00000192413 1943 ntBASIC18.84■□□□□ 0.61
Lysmd4Q8CC84 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Lysmd4Q8CC84 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Lysmd4Q8CC84 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Lysmd4Q8CC84 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Lysmd4Q8CC84 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Lysmd4Q8CC84 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
Lysmd4Q8CC84 Nsd1-206ENSMUST00000224918 1001 ntBASIC18.83■□□□□ 0.6
Lysmd4Q8CC84 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC18.83■□□□□ 0.6
Lysmd4Q8CC84 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Lysmd4Q8CC84 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
Lysmd4Q8CC84 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Lysmd4Q8CC84 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Lysmd4Q8CC84 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Lysmd4Q8CC84 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Lysmd4Q8CC84 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Lysmd4Q8CC84 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Lysmd4Q8CC84 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Lysmd4Q8CC84 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Lysmd4Q8CC84 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Lysmd4Q8CC84 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Lysmd4Q8CC84 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Lysmd4Q8CC84 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC18.82■□□□□ 0.6
Lysmd4Q8CC84 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Lysmd4Q8CC84 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Lysmd4Q8CC84 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Lysmd4Q8CC84 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
Lysmd4Q8CC84 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Lysmd4Q8CC84 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Lysmd4Q8CC84 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Lysmd4Q8CC84 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Lysmd4Q8CC84 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC18.81■□□□□ 0.6
Lysmd4Q8CC84 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Lysmd4Q8CC84 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Lysmd4Q8CC84 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Lysmd4Q8CC84 AC124392.1-201ENSMUST00000225172 5324 ntBASIC18.81■□□□□ 0.6
Lysmd4Q8CC84 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Lysmd4Q8CC84 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Lysmd4Q8CC84 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Lysmd4Q8CC84 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Lysmd4Q8CC84 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Lysmd4Q8CC84 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Lysmd4Q8CC84 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Lysmd4Q8CC84 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC18.81■□□□□ 0.6
Lysmd4Q8CC84 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Lysmd4Q8CC84 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Lysmd4Q8CC84 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Lysmd4Q8CC84 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Lysmd4Q8CC84 Gm5987-201ENSMUST00000196433 1151 ntBASIC18.8■□□□□ 0.6
Lysmd4Q8CC84 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC18.8■□□□□ 0.6
Lysmd4Q8CC84 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC18.8■□□□□ 0.6
Lysmd4Q8CC84 Gm6311-201ENSMUST00000073790 878 ntBASIC18.8■□□□□ 0.6
Lysmd4Q8CC84 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Lysmd4Q8CC84 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Lysmd4Q8CC84 Gm15043-201ENSMUST00000118843 1543 ntBASIC18.79■□□□□ 0.6
Lysmd4Q8CC84 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Lysmd4Q8CC84 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Lysmd4Q8CC84 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC18.79■□□□□ 0.6
Lysmd4Q8CC84 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Lysmd4Q8CC84 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC18.79■□□□□ 0.6
Lysmd4Q8CC84 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Lysmd4Q8CC84 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Lysmd4Q8CC84 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Lysmd4Q8CC84 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Lysmd4Q8CC84 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Lysmd4Q8CC84 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC18.78■□□□□ 0.6
Lysmd4Q8CC84 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Lysmd4Q8CC84 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Lysmd4Q8CC84 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Lysmd4Q8CC84 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Lysmd4Q8CC84 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Lysmd4Q8CC84 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Lysmd4Q8CC84 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Lysmd4Q8CC84 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC18.78■□□□□ 0.6
Lysmd4Q8CC84 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 13.9 ms