Protein–RNA interactions for Protein: Q80SX8

Pif1, ATP-dependent DNA helicase PIF1, mousemouse

Predictions only

Length 650 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pif1Q80SX8 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pif1Q80SX8 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pif1Q80SX8 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Pif1Q80SX8 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Pif1Q80SX8 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC19.38■□□□□ 0.69
Pif1Q80SX8 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC19.38■□□□□ 0.69
Pif1Q80SX8 Gm27454-201ENSMUST00000185090 204 ntBASIC19.38■□□□□ 0.69
Pif1Q80SX8 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Pif1Q80SX8 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Pif1Q80SX8 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC19.38■□□□□ 0.69
Pif1Q80SX8 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Pif1Q80SX8 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Pif1Q80SX8 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC19.37■□□□□ 0.69
Pif1Q80SX8 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Pif1Q80SX8 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC19.37■□□□□ 0.69
Pif1Q80SX8 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Pif1Q80SX8 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pif1Q80SX8 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC19.36■□□□□ 0.69
Pif1Q80SX8 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pif1Q80SX8 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pif1Q80SX8 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC19.36■□□□□ 0.69
Pif1Q80SX8 Serp2-204ENSMUST00000228055 705 ntBASIC19.36■□□□□ 0.69
Pif1Q80SX8 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pif1Q80SX8 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pif1Q80SX8 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Pif1Q80SX8 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pif1Q80SX8 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Pif1Q80SX8 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Pif1Q80SX8 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC19.35■□□□□ 0.69
Pif1Q80SX8 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Pif1Q80SX8 Gm45417-201ENSMUST00000209533 758 ntBASIC19.35■□□□□ 0.69
Pif1Q80SX8 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pif1Q80SX8 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pif1Q80SX8 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Pif1Q80SX8 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC19.34■□□□□ 0.69
Pif1Q80SX8 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Pif1Q80SX8 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Pif1Q80SX8 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pif1Q80SX8 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pif1Q80SX8 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Pif1Q80SX8 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC19.33■□□□□ 0.69
Pif1Q80SX8 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Pif1Q80SX8 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Pif1Q80SX8 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Pif1Q80SX8 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC19.33■□□□□ 0.68
Pif1Q80SX8 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Pif1Q80SX8 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Pif1Q80SX8 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Pif1Q80SX8 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pif1Q80SX8 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pif1Q80SX8 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pif1Q80SX8 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pif1Q80SX8 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
Pif1Q80SX8 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC19.32■□□□□ 0.68
Pif1Q80SX8 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pif1Q80SX8 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pif1Q80SX8 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Pif1Q80SX8 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Pif1Q80SX8 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Pif1Q80SX8 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Pif1Q80SX8 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC19.31■□□□□ 0.68
Pif1Q80SX8 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC19.31■□□□□ 0.68
Pif1Q80SX8 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Pif1Q80SX8 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pif1Q80SX8 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pif1Q80SX8 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pif1Q80SX8 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC19.3■□□□□ 0.68
Pif1Q80SX8 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC19.3■□□□□ 0.68
Pif1Q80SX8 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC19.3■□□□□ 0.68
Pif1Q80SX8 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Pif1Q80SX8 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Pif1Q80SX8 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pif1Q80SX8 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pif1Q80SX8 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Pif1Q80SX8 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC19.29■□□□□ 0.68
Pif1Q80SX8 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pif1Q80SX8 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC19.29■□□□□ 0.68
Pif1Q80SX8 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pif1Q80SX8 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Pif1Q80SX8 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pif1Q80SX8 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pif1Q80SX8 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pif1Q80SX8 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pif1Q80SX8 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC19.29■□□□□ 0.68
Pif1Q80SX8 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Pif1Q80SX8 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pif1Q80SX8 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
Pif1Q80SX8 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Pif1Q80SX8 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pif1Q80SX8 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pif1Q80SX8 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
Pif1Q80SX8 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC19.27■□□□□ 0.68
Pif1Q80SX8 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Pif1Q80SX8 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Pif1Q80SX8 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Pif1Q80SX8 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Pif1Q80SX8 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Pif1Q80SX8 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Pif1Q80SX8 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Pif1Q80SX8 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms