Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rnf220Q6PDX6 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rnf220Q6PDX6 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Rnf220Q6PDX6 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Rnf220Q6PDX6 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC19.74■□□□□ 0.75
Rnf220Q6PDX6 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Rnf220Q6PDX6 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Rnf220Q6PDX6 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rnf220Q6PDX6 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rnf220Q6PDX6 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Rnf220Q6PDX6 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rnf220Q6PDX6 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC19.73■□□□□ 0.75
Rnf220Q6PDX6 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rnf220Q6PDX6 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Rnf220Q6PDX6 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Rnf220Q6PDX6 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rnf220Q6PDX6 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rnf220Q6PDX6 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC19.73■□□□□ 0.75
Rnf220Q6PDX6 Gm43545-201ENSMUST00000196765 2779 ntBASIC19.73■□□□□ 0.75
Rnf220Q6PDX6 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rnf220Q6PDX6 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Rnf220Q6PDX6 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC19.73■□□□□ 0.75
Rnf220Q6PDX6 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rnf220Q6PDX6 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rnf220Q6PDX6 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Rnf220Q6PDX6 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rnf220Q6PDX6 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Rnf220Q6PDX6 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rnf220Q6PDX6 Gm4799-201ENSMUST00000095396 657 ntBASIC19.72■□□□□ 0.75
Rnf220Q6PDX6 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rnf220Q6PDX6 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Rnf220Q6PDX6 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Rnf220Q6PDX6 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Rnf220Q6PDX6 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rnf220Q6PDX6 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rnf220Q6PDX6 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rnf220Q6PDX6 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Rnf220Q6PDX6 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rnf220Q6PDX6 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Rnf220Q6PDX6 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rnf220Q6PDX6 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rnf220Q6PDX6 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rnf220Q6PDX6 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Rnf220Q6PDX6 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rnf220Q6PDX6 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rnf220Q6PDX6 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Rnf220Q6PDX6 Gm9812-201ENSMUST00000061934 968 ntBASIC19.69■□□□□ 0.74
Rnf220Q6PDX6 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Rnf220Q6PDX6 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rnf220Q6PDX6 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rnf220Q6PDX6 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rnf220Q6PDX6 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rnf220Q6PDX6 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rnf220Q6PDX6 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rnf220Q6PDX6 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
Rnf220Q6PDX6 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rnf220Q6PDX6 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rnf220Q6PDX6 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rnf220Q6PDX6 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rnf220Q6PDX6 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rnf220Q6PDX6 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC19.67■□□□□ 0.74
Rnf220Q6PDX6 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rnf220Q6PDX6 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rnf220Q6PDX6 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rnf220Q6PDX6 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC19.67■□□□□ 0.74
Rnf220Q6PDX6 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
Rnf220Q6PDX6 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Rnf220Q6PDX6 AC153911.1-201ENSMUST00000220378 758 ntBASIC19.67■□□□□ 0.74
Rnf220Q6PDX6 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC19.67■□□□□ 0.74
Rnf220Q6PDX6 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rnf220Q6PDX6 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rnf220Q6PDX6 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rnf220Q6PDX6 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Rnf220Q6PDX6 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rnf220Q6PDX6 Gm38342-201ENSMUST00000195710 2980 ntBASIC19.66■□□□□ 0.74
Rnf220Q6PDX6 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rnf220Q6PDX6 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rnf220Q6PDX6 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Rnf220Q6PDX6 AC122317.2-201ENSMUST00000218708 1248 ntBASIC19.66■□□□□ 0.74
Rnf220Q6PDX6 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Rnf220Q6PDX6 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rnf220Q6PDX6 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Rnf220Q6PDX6 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rnf220Q6PDX6 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Rnf220Q6PDX6 Gm7432-201ENSMUST00000210343 879 ntBASIC19.65■□□□□ 0.74
Rnf220Q6PDX6 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC19.65■□□□□ 0.74
Rnf220Q6PDX6 AC154454.1-201ENSMUST00000225253 216 ntBASIC19.65■□□□□ 0.74
Rnf220Q6PDX6 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rnf220Q6PDX6 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rnf220Q6PDX6 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Rnf220Q6PDX6 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rnf220Q6PDX6 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rnf220Q6PDX6 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rnf220Q6PDX6 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rnf220Q6PDX6 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC19.65■□□□□ 0.74
Rnf220Q6PDX6 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
Rnf220Q6PDX6 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
Rnf220Q6PDX6 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Rnf220Q6PDX6 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Rnf220Q6PDX6 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 15.8 ms