Protein–RNA interactions for Protein: Q61191

Hcfc1, Host cell factor 1, mousemouse

Known RBP Predictions only

Length 2,045 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcfc1Q61191 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
Hcfc1Q61191 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Hcfc1Q61191 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Hcfc1Q61191 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Hcfc1Q61191 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Hcfc1Q61191 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Hcfc1Q61191 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Hcfc1Q61191 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Hcfc1Q61191 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Hcfc1Q61191 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Hcfc1Q61191 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Hcfc1Q61191 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Hcfc1Q61191 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Hcfc1Q61191 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC18.05■□□□□ 0.48
Hcfc1Q61191 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC18.05■□□□□ 0.48
Hcfc1Q61191 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Hcfc1Q61191 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC18.04■□□□□ 0.48
Hcfc1Q61191 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC18.04■□□□□ 0.48
Hcfc1Q61191 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC18.04■□□□□ 0.48
Hcfc1Q61191 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Hcfc1Q61191 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Hcfc1Q61191 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Hcfc1Q61191 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Hcfc1Q61191 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC18.03■□□□□ 0.48
Hcfc1Q61191 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Hcfc1Q61191 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Hcfc1Q61191 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Hcfc1Q61191 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Hcfc1Q61191 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC18.03■□□□□ 0.48
Hcfc1Q61191 Gm8495-201ENSMUST00000188740 694 ntBASIC18.03■□□□□ 0.48
Hcfc1Q61191 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Hcfc1Q61191 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Hcfc1Q61191 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Hcfc1Q61191 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Hcfc1Q61191 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Hcfc1Q61191 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
Hcfc1Q61191 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Hcfc1Q61191 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Hcfc1Q61191 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Hcfc1Q61191 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
Hcfc1Q61191 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Hcfc1Q61191 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC18.02■□□□□ 0.47
Hcfc1Q61191 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.47
Hcfc1Q61191 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Hcfc1Q61191 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Hcfc1Q61191 AC116713.1-201ENSMUST00000215074 430 ntBASIC18.01■□□□□ 0.47
Hcfc1Q61191 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Hcfc1Q61191 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Hcfc1Q61191 Gm12251-201ENSMUST00000117893 792 ntBASIC18.01■□□□□ 0.47
Hcfc1Q61191 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Hcfc1Q61191 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC18.01■□□□□ 0.47
Hcfc1Q61191 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Hcfc1Q61191 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC18■□□□□ 0.47
Hcfc1Q61191 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Hcfc1Q61191 Gm10657-201ENSMUST00000193528 1031 ntBASIC18■□□□□ 0.47
Hcfc1Q61191 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Hcfc1Q61191 Krt8-ps-201ENSMUST00000208495 945 ntBASIC18■□□□□ 0.47
Hcfc1Q61191 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Hcfc1Q61191 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Hcfc1Q61191 AC164629.5-201ENSMUST00000220387 632 ntBASIC17.99■□□□□ 0.47
Hcfc1Q61191 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC17.99■□□□□ 0.47
Hcfc1Q61191 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Hcfc1Q61191 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Hcfc1Q61191 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Hcfc1Q61191 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Hcfc1Q61191 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC17.98■□□□□ 0.47
Hcfc1Q61191 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC17.98■□□□□ 0.47
Hcfc1Q61191 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC17.98■□□□□ 0.47
Hcfc1Q61191 Mir7075-201ENSMUST00000184187 82 ntBASIC17.98■□□□□ 0.47
Hcfc1Q61191 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Hcfc1Q61191 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Hcfc1Q61191 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Hcfc1Q61191 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Hcfc1Q61191 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC17.97■□□□□ 0.47
Hcfc1Q61191 Gm26571-201ENSMUST00000181399 666 ntBASIC17.97■□□□□ 0.47
Hcfc1Q61191 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Hcfc1Q61191 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC17.97■□□□□ 0.47
Hcfc1Q61191 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC17.97■□□□□ 0.47
Hcfc1Q61191 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Hcfc1Q61191 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Hcfc1Q61191 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC17.96■□□□□ 0.47
Hcfc1Q61191 Gm9870-201ENSMUST00000063874 645 ntBASIC17.96■□□□□ 0.47
Hcfc1Q61191 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Hcfc1Q61191 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Hcfc1Q61191 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Hcfc1Q61191 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Hcfc1Q61191 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
Hcfc1Q61191 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
Hcfc1Q61191 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
Hcfc1Q61191 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Hcfc1Q61191 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC17.95■□□□□ 0.46
Hcfc1Q61191 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC17.95■□□□□ 0.46
Hcfc1Q61191 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Hcfc1Q61191 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Hcfc1Q61191 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Hcfc1Q61191 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Hcfc1Q61191 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Hcfc1Q61191 Gm8770-201ENSMUST00000121113 1109 ntBASIC17.94■□□□□ 0.46
Hcfc1Q61191 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC17.94■□□□□ 0.46
Hcfc1Q61191 Gm21168-201ENSMUST00000199646 1096 ntBASIC17.94■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms