Protein–RNA interactions for Protein: P70407

Cdh9, Cadherin-9, mousemouse

Predictions only

Length 786 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh9P70407 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.08
Cdh9P70407 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Cdh9P70407 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.08
Cdh9P70407 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Cdh9P70407 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Cdh9P70407 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Cdh9P70407 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Cdh9P70407 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Cdh9P70407 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC21.82■■□□□ 1.08
Cdh9P70407 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Cdh9P70407 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Cdh9P70407 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC21.81■■□□□ 1.08
Cdh9P70407 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Cdh9P70407 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC21.81■■□□□ 1.08
Cdh9P70407 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Cdh9P70407 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC21.81■■□□□ 1.08
Cdh9P70407 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
Cdh9P70407 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Cdh9P70407 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Cdh9P70407 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Cdh9P70407 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
Cdh9P70407 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Cdh9P70407 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Cdh9P70407 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Cdh9P70407 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Cdh9P70407 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC21.79■■□□□ 1.08
Cdh9P70407 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Cdh9P70407 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
Cdh9P70407 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC21.79■■□□□ 1.08
Cdh9P70407 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC21.79■■□□□ 1.08
Cdh9P70407 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Cdh9P70407 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Cdh9P70407 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Cdh9P70407 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Cdh9P70407 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC21.79■■□□□ 1.08
Cdh9P70407 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
Cdh9P70407 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Cdh9P70407 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Cdh9P70407 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
Cdh9P70407 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Cdh9P70407 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Cdh9P70407 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC21.78■■□□□ 1.08
Cdh9P70407 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Cdh9P70407 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Cdh9P70407 Gm42418-201ENSMUST00000182010 1831 ntBASIC21.78■■□□□ 1.08
Cdh9P70407 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Cdh9P70407 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Cdh9P70407 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Cdh9P70407 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC21.77■■□□□ 1.08
Cdh9P70407 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Cdh9P70407 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC21.76■■□□□ 1.07
Cdh9P70407 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
Cdh9P70407 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
Cdh9P70407 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Cdh9P70407 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC21.76■■□□□ 1.07
Cdh9P70407 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC21.76■■□□□ 1.07
Cdh9P70407 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
Cdh9P70407 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Cdh9P70407 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Cdh9P70407 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Cdh9P70407 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Cdh9P70407 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Cdh9P70407 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC21.75■■□□□ 1.07
Cdh9P70407 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Cdh9P70407 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Cdh9P70407 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
Cdh9P70407 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Cdh9P70407 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Cdh9P70407 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Cdh9P70407 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Cdh9P70407 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC21.73■■□□□ 1.07
Cdh9P70407 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC21.73■■□□□ 1.07
Cdh9P70407 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Cdh9P70407 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
Cdh9P70407 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Cdh9P70407 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
Cdh9P70407 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Cdh9P70407 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Cdh9P70407 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Cdh9P70407 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC21.72■■□□□ 1.07
Cdh9P70407 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC21.72■■□□□ 1.07
Cdh9P70407 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Cdh9P70407 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Cdh9P70407 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Cdh9P70407 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Cdh9P70407 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Cdh9P70407 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Cdh9P70407 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC21.71■■□□□ 1.07
Cdh9P70407 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC21.71■■□□□ 1.07
Cdh9P70407 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
Cdh9P70407 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.07
Cdh9P70407 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC21.7■■□□□ 1.07
Cdh9P70407 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC21.7■■□□□ 1.07
Cdh9P70407 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Cdh9P70407 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Cdh9P70407 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Cdh9P70407 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC21.7■■□□□ 1.06
Cdh9P70407 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Cdh9P70407 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Cdh9P70407 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms