Protein–RNA interactions for Protein: P70178

Six5, Homeobox protein SIX5, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six5P70178 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Six5P70178 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Six5P70178 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Six5P70178 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Six5P70178 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Six5P70178 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Six5P70178 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Six5P70178 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Six5P70178 Gm8093-201ENSMUST00000128935 1892 ntBASIC19.69■□□□□ 0.74
Six5P70178 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Six5P70178 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Six5P70178 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Six5P70178 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Six5P70178 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Six5P70178 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Six5P70178 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Six5P70178 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC19.67■□□□□ 0.74
Six5P70178 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Six5P70178 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Six5P70178 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Six5P70178 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Six5P70178 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Six5P70178 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Six5P70178 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Six5P70178 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Six5P70178 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Six5P70178 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Six5P70178 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Six5P70178 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Six5P70178 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Six5P70178 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Six5P70178 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
Six5P70178 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Six5P70178 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Six5P70178 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Six5P70178 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Six5P70178 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC19.65■□□□□ 0.74
Six5P70178 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Six5P70178 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Six5P70178 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Six5P70178 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Six5P70178 Gm10232-201ENSMUST00000089221 720 ntBASIC19.64■□□□□ 0.73
Six5P70178 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Six5P70178 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC19.64■□□□□ 0.73
Six5P70178 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Six5P70178 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Six5P70178 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Six5P70178 AC158990.1-201ENSMUST00000221450 2016 ntBASIC19.63■□□□□ 0.73
Six5P70178 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Six5P70178 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Six5P70178 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Six5P70178 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Six5P70178 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC19.62■□□□□ 0.73
Six5P70178 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Six5P70178 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC19.62■□□□□ 0.73
Six5P70178 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Six5P70178 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Six5P70178 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Six5P70178 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Six5P70178 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
Six5P70178 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Six5P70178 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC19.62■□□□□ 0.73
Six5P70178 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Six5P70178 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Six5P70178 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Six5P70178 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Six5P70178 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC19.61■□□□□ 0.73
Six5P70178 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Six5P70178 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Six5P70178 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC19.61■□□□□ 0.73
Six5P70178 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Six5P70178 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC19.61■□□□□ 0.73
Six5P70178 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
Six5P70178 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Six5P70178 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
Six5P70178 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Six5P70178 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Six5P70178 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Six5P70178 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Six5P70178 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Six5P70178 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Six5P70178 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC19.6■□□□□ 0.73
Six5P70178 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC19.6■□□□□ 0.73
Six5P70178 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Six5P70178 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Six5P70178 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Six5P70178 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Six5P70178 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Six5P70178 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Six5P70178 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Six5P70178 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Six5P70178 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Six5P70178 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC19.59■□□□□ 0.73
Six5P70178 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Six5P70178 AC164883.3-201ENSMUST00000227396 1774 ntBASIC19.59■□□□□ 0.73
Six5P70178 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Six5P70178 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Six5P70178 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Six5P70178 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Six5P70178 Gm5812-201ENSMUST00000061073 957 ntBASIC19.58■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 101.5 ms