Protein–RNA interactions for Protein: P61620

Sec61a1, Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1P61620 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Sec61a1P61620 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Sec61a1P61620 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Sec61a1P61620 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Sec61a1P61620 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Sec61a1P61620 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Sec61a1P61620 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Sec61a1P61620 Gm10616-201ENSMUST00000205285 2127 ntBASIC18.34■□□□□ 0.53
Sec61a1P61620 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Sec61a1P61620 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Sec61a1P61620 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Sec61a1P61620 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Sec61a1P61620 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC18.34■□□□□ 0.53
Sec61a1P61620 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC18.34■□□□□ 0.53
Sec61a1P61620 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Sec61a1P61620 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Sec61a1P61620 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC18.33■□□□□ 0.53
Sec61a1P61620 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Sec61a1P61620 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Sec61a1P61620 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
Sec61a1P61620 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Sec61a1P61620 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Sec61a1P61620 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Sec61a1P61620 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Sec61a1P61620 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC18.33■□□□□ 0.52
Sec61a1P61620 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Sec61a1P61620 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Sec61a1P61620 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Sec61a1P61620 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
Sec61a1P61620 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Sec61a1P61620 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Sec61a1P61620 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Sec61a1P61620 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC18.33■□□□□ 0.52
Sec61a1P61620 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Sec61a1P61620 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Sec61a1P61620 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Sec61a1P61620 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Sec61a1P61620 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Sec61a1P61620 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Sec61a1P61620 Gm22567-201ENSMUST00000175542 342 ntBASIC18.32■□□□□ 0.52
Sec61a1P61620 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
Sec61a1P61620 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Sec61a1P61620 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC18.32■□□□□ 0.52
Sec61a1P61620 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sec61a1P61620 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Sec61a1P61620 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sec61a1P61620 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sec61a1P61620 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sec61a1P61620 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sec61a1P61620 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sec61a1P61620 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Sec61a1P61620 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Sec61a1P61620 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC18.3■□□□□ 0.52
Sec61a1P61620 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Sec61a1P61620 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Sec61a1P61620 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Sec61a1P61620 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Sec61a1P61620 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC18.3■□□□□ 0.52
Sec61a1P61620 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Sec61a1P61620 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Sec61a1P61620 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Sec61a1P61620 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Sec61a1P61620 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Sec61a1P61620 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Sec61a1P61620 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Sec61a1P61620 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Sec61a1P61620 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Sec61a1P61620 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Sec61a1P61620 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Sec61a1P61620 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Sec61a1P61620 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC18.28■□□□□ 0.52
Sec61a1P61620 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Sec61a1P61620 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Sec61a1P61620 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Sec61a1P61620 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Sec61a1P61620 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Sec61a1P61620 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Sec61a1P61620 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Sec61a1P61620 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Sec61a1P61620 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC18.27■□□□□ 0.52
Sec61a1P61620 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
Sec61a1P61620 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC18.27■□□□□ 0.51
Sec61a1P61620 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Sec61a1P61620 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.51
Sec61a1P61620 Gm7199-201ENSMUST00000118327 1485 ntBASIC18.26■□□□□ 0.51
Sec61a1P61620 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Sec61a1P61620 Iqck-206ENSMUST00000208658 2891 ntBASIC18.26■□□□□ 0.51
Sec61a1P61620 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Sec61a1P61620 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Sec61a1P61620 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC18.26■□□□□ 0.51
Sec61a1P61620 Gm15043-201ENSMUST00000118843 1543 ntBASIC18.26■□□□□ 0.51
Sec61a1P61620 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Sec61a1P61620 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Sec61a1P61620 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Sec61a1P61620 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC18.25■□□□□ 0.51
Sec61a1P61620 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Sec61a1P61620 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Sec61a1P61620 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Sec61a1P61620 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Sec61a1P61620 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms