Protein–RNA interactions for Protein: P56564

Slc1a3, Excitatory amino acid transporter 1, mousemouse

Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc1a3P56564 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Slc1a3P56564 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Slc1a3P56564 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Slc1a3P56564 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Slc1a3P56564 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Slc1a3P56564 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Slc1a3P56564 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Slc1a3P56564 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC18.83■□□□□ 0.6
Slc1a3P56564 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Slc1a3P56564 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Slc1a3P56564 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Slc1a3P56564 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Slc1a3P56564 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Slc1a3P56564 AC164883.3-201ENSMUST00000227396 1774 ntBASIC18.82■□□□□ 0.6
Slc1a3P56564 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Slc1a3P56564 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Slc1a3P56564 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Slc1a3P56564 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Slc1a3P56564 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Slc1a3P56564 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Slc1a3P56564 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Slc1a3P56564 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC18.81■□□□□ 0.6
Slc1a3P56564 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Slc1a3P56564 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Slc1a3P56564 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Slc1a3P56564 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Slc1a3P56564 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Slc1a3P56564 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Slc1a3P56564 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Slc1a3P56564 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Slc1a3P56564 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Slc1a3P56564 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Slc1a3P56564 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Slc1a3P56564 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC18.8■□□□□ 0.6
Slc1a3P56564 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Slc1a3P56564 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Slc1a3P56564 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Slc1a3P56564 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Slc1a3P56564 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Slc1a3P56564 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC18.79■□□□□ 0.6
Slc1a3P56564 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC18.79■□□□□ 0.6
Slc1a3P56564 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Slc1a3P56564 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC18.79■□□□□ 0.6
Slc1a3P56564 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Slc1a3P56564 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Slc1a3P56564 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Slc1a3P56564 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC18.79■□□□□ 0.6
Slc1a3P56564 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
Slc1a3P56564 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Slc1a3P56564 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC18.78■□□□□ 0.6
Slc1a3P56564 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Slc1a3P56564 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC18.78■□□□□ 0.6
Slc1a3P56564 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Slc1a3P56564 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Slc1a3P56564 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
Slc1a3P56564 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Slc1a3P56564 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Slc1a3P56564 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Slc1a3P56564 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Slc1a3P56564 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Slc1a3P56564 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC18.77■□□□□ 0.6
Slc1a3P56564 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Slc1a3P56564 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Slc1a3P56564 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Slc1a3P56564 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Slc1a3P56564 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Slc1a3P56564 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Slc1a3P56564 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC18.76■□□□□ 0.59
Slc1a3P56564 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Slc1a3P56564 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Slc1a3P56564 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Slc1a3P56564 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC18.76■□□□□ 0.59
Slc1a3P56564 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Slc1a3P56564 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Slc1a3P56564 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Slc1a3P56564 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC18.76■□□□□ 0.59
Slc1a3P56564 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Slc1a3P56564 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Slc1a3P56564 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Slc1a3P56564 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC18.75■□□□□ 0.59
Slc1a3P56564 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC18.75■□□□□ 0.59
Slc1a3P56564 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Slc1a3P56564 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Slc1a3P56564 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Slc1a3P56564 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Slc1a3P56564 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Slc1a3P56564 Gm44949-201ENSMUST00000206423 1450 ntBASIC18.74■□□□□ 0.59
Slc1a3P56564 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC18.74■□□□□ 0.59
Slc1a3P56564 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Slc1a3P56564 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Slc1a3P56564 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Slc1a3P56564 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Slc1a3P56564 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Slc1a3P56564 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Slc1a3P56564 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Slc1a3P56564 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC18.73■□□□□ 0.59
Slc1a3P56564 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Slc1a3P56564 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Slc1a3P56564 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Slc1a3P56564 Snhg20-203ENSMUST00000182811 2153 ntBASIC18.73■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 49.4 ms