Protein–RNA interactions for Protein: P46467

Vps4b, Vacuolar protein sorting-associated protein 4B, mousemouse

Known RBP Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4bP46467 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC21.3■■□□□ 1
Vps4bP46467 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Vps4bP46467 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
Vps4bP46467 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC21.3■■□□□ 1
Vps4bP46467 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Vps4bP46467 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Vps4bP46467 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Vps4bP46467 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC21.3■■□□□ 1
Vps4bP46467 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Vps4bP46467 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Vps4bP46467 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
Vps4bP46467 Gm43592-201ENSMUST00000196922 1165 ntBASIC21.29■■□□□ 1
Vps4bP46467 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
Vps4bP46467 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
Vps4bP46467 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC21.28■■□□□ 1
Vps4bP46467 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Vps4bP46467 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC21.28■■□□□ 1
Vps4bP46467 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC21.28■■□□□ 1
Vps4bP46467 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
Vps4bP46467 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
Vps4bP46467 Gm43403-201ENSMUST00000198011 1786 ntBASIC21.28■■□□□ 1
Vps4bP46467 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Vps4bP46467 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Vps4bP46467 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Vps4bP46467 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Vps4bP46467 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC21.27■■□□□ 1
Vps4bP46467 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC21.27■□□□□ 0.99
Vps4bP46467 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Vps4bP46467 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Vps4bP46467 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Vps4bP46467 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Vps4bP46467 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Vps4bP46467 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
Vps4bP46467 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Vps4bP46467 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Vps4bP46467 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
Vps4bP46467 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Vps4bP46467 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Vps4bP46467 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
Vps4bP46467 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Vps4bP46467 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC21.24■□□□□ 0.99
Vps4bP46467 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Vps4bP46467 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
Vps4bP46467 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC21.23■□□□□ 0.99
Vps4bP46467 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC21.23■□□□□ 0.99
Vps4bP46467 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Vps4bP46467 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Vps4bP46467 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC21.23■□□□□ 0.99
Vps4bP46467 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC21.23■□□□□ 0.99
Vps4bP46467 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Vps4bP46467 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Vps4bP46467 AC164883.3-201ENSMUST00000227396 1774 ntBASIC21.23■□□□□ 0.99
Vps4bP46467 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Vps4bP46467 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Vps4bP46467 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Vps4bP46467 Gm38160-201ENSMUST00000193090 2499 ntBASIC21.22■□□□□ 0.99
Vps4bP46467 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Vps4bP46467 Gm43006-201ENSMUST00000197702 1602 ntBASIC21.22■□□□□ 0.99
Vps4bP46467 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Vps4bP46467 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Vps4bP46467 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Vps4bP46467 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Vps4bP46467 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
Vps4bP46467 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Vps4bP46467 Gm10420-201ENSMUST00000121713 882 ntBASIC21.21■□□□□ 0.99
Vps4bP46467 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Vps4bP46467 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Vps4bP46467 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
Vps4bP46467 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Vps4bP46467 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Vps4bP46467 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC21.2■□□□□ 0.98
Vps4bP46467 AC116713.1-201ENSMUST00000215074 430 ntBASIC21.2■□□□□ 0.98
Vps4bP46467 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC21.2■□□□□ 0.98
Vps4bP46467 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Vps4bP46467 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Vps4bP46467 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Vps4bP46467 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC21.2■□□□□ 0.98
Vps4bP46467 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Vps4bP46467 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Vps4bP46467 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Vps4bP46467 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC21.19■□□□□ 0.98
Vps4bP46467 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC21.19■□□□□ 0.98
Vps4bP46467 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Vps4bP46467 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Vps4bP46467 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
Vps4bP46467 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC21.18■□□□□ 0.98
Vps4bP46467 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Vps4bP46467 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC21.18■□□□□ 0.98
Vps4bP46467 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Vps4bP46467 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Vps4bP46467 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Vps4bP46467 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
Vps4bP46467 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Vps4bP46467 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Vps4bP46467 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Vps4bP46467 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Vps4bP46467 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
Vps4bP46467 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
Vps4bP46467 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Vps4bP46467 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 59.6 ms