Protein–RNA interactions for Protein: P32958

Rom1, Rod outer segment membrane protein 1, mousemouse

Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rom1P32958 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC16.63■□□□□ 0.25
Rom1P32958 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Rom1P32958 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC16.63■□□□□ 0.25
Rom1P32958 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Rom1P32958 AC164883.3-201ENSMUST00000227396 1774 ntBASIC16.63■□□□□ 0.25
Rom1P32958 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Rom1P32958 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Rom1P32958 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC16.63■□□□□ 0.25
Rom1P32958 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rom1P32958 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rom1P32958 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rom1P32958 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rom1P32958 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rom1P32958 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rom1P32958 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Rom1P32958 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rom1P32958 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC16.62■□□□□ 0.25
Rom1P32958 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rom1P32958 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rom1P32958 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rom1P32958 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Rom1P32958 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Rom1P32958 Gm4430-201ENSMUST00000192413 1943 ntBASIC16.61■□□□□ 0.25
Rom1P32958 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Rom1P32958 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rom1P32958 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rom1P32958 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rom1P32958 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Rom1P32958 Gm44949-201ENSMUST00000206423 1450 ntBASIC16.61■□□□□ 0.25
Rom1P32958 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rom1P32958 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC16.6■□□□□ 0.25
Rom1P32958 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
Rom1P32958 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC16.6■□□□□ 0.25
Rom1P32958 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rom1P32958 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Rom1P32958 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rom1P32958 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC16.6■□□□□ 0.25
Rom1P32958 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Rom1P32958 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rom1P32958 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rom1P32958 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Rom1P32958 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rom1P32958 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rom1P32958 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC16.59■□□□□ 0.25
Rom1P32958 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Rom1P32958 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rom1P32958 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rom1P32958 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC16.59■□□□□ 0.25
Rom1P32958 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Rom1P32958 Gm5987-201ENSMUST00000196433 1151 ntBASIC16.59■□□□□ 0.25
Rom1P32958 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
Rom1P32958 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rom1P32958 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC16.59■□□□□ 0.25
Rom1P32958 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Rom1P32958 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Rom1P32958 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC16.58■□□□□ 0.24
Rom1P32958 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Rom1P32958 Gm45364-201ENSMUST00000210883 159 ntBASIC16.58■□□□□ 0.24
Rom1P32958 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Rom1P32958 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC16.58■□□□□ 0.24
Rom1P32958 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Rom1P32958 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Rom1P32958 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Rom1P32958 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Rom1P32958 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Rom1P32958 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rom1P32958 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Rom1P32958 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rom1P32958 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rom1P32958 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC16.57■□□□□ 0.24
Rom1P32958 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rom1P32958 Gm6821-201ENSMUST00000107540 542 ntBASIC16.57■□□□□ 0.24
Rom1P32958 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rom1P32958 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rom1P32958 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rom1P32958 Gm34220-201ENSMUST00000223001 2709 ntBASIC16.57■□□□□ 0.24
Rom1P32958 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rom1P32958 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Rom1P32958 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rom1P32958 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rom1P32958 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rom1P32958 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC16.56■□□□□ 0.24
Rom1P32958 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Rom1P32958 Gm9939-201ENSMUST00000067161 1154 ntBASIC16.56■□□□□ 0.24
Rom1P32958 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rom1P32958 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rom1P32958 Gm5913-201ENSMUST00000119397 1399 ntBASIC16.55■□□□□ 0.24
Rom1P32958 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rom1P32958 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC16.55■□□□□ 0.24
Rom1P32958 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rom1P32958 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rom1P32958 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rom1P32958 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rom1P32958 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC16.54■□□□□ 0.24
Rom1P32958 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rom1P32958 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Rom1P32958 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rom1P32958 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Rom1P32958 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC16.54■□□□□ 0.24
Rom1P32958 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 17.2 ms