Protein–RNA interactions for Protein: O88870

Best1, Bestrophin-1, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Best1O88870 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Best1O88870 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Best1O88870 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC20.41■□□□□ 0.86
Best1O88870 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Best1O88870 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Best1O88870 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Best1O88870 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Best1O88870 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Best1O88870 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Best1O88870 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC20.4■□□□□ 0.86
Best1O88870 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Best1O88870 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Best1O88870 Gm12922-201ENSMUST00000120626 809 ntBASIC20.39■□□□□ 0.85
Best1O88870 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Best1O88870 AC153962.1-201ENSMUST00000218530 1948 ntBASIC20.39■□□□□ 0.85
Best1O88870 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC20.39■□□□□ 0.85
Best1O88870 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Best1O88870 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Best1O88870 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC20.38■□□□□ 0.85
Best1O88870 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC20.38■□□□□ 0.85
Best1O88870 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC20.38■□□□□ 0.85
Best1O88870 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Best1O88870 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
Best1O88870 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Best1O88870 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC20.38■□□□□ 0.85
Best1O88870 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Best1O88870 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Best1O88870 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Best1O88870 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Best1O88870 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Best1O88870 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Best1O88870 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Best1O88870 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Best1O88870 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
Best1O88870 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Best1O88870 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Best1O88870 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
Best1O88870 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Best1O88870 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Best1O88870 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Best1O88870 Gm9847-201ENSMUST00000052528 599 ntBASIC20.35■□□□□ 0.85
Best1O88870 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Best1O88870 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC20.34■□□□□ 0.85
Best1O88870 Gm42418-201ENSMUST00000182010 1831 ntBASIC20.34■□□□□ 0.85
Best1O88870 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Best1O88870 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Best1O88870 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC20.34■□□□□ 0.85
Best1O88870 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC20.34■□□□□ 0.85
Best1O88870 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC20.34■□□□□ 0.85
Best1O88870 Gm13241-201ENSMUST00000094493 780 ntBASIC20.34■□□□□ 0.85
Best1O88870 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Best1O88870 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Best1O88870 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Best1O88870 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Best1O88870 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
Best1O88870 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC20.33■□□□□ 0.85
Best1O88870 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Best1O88870 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Best1O88870 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC20.33■□□□□ 0.84
Best1O88870 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Best1O88870 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC20.32■□□□□ 0.84
Best1O88870 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC20.32■□□□□ 0.84
Best1O88870 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Best1O88870 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Best1O88870 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC20.32■□□□□ 0.84
Best1O88870 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Best1O88870 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Best1O88870 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC20.32■□□□□ 0.84
Best1O88870 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC20.32■□□□□ 0.84
Best1O88870 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Best1O88870 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Best1O88870 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Best1O88870 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Best1O88870 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Best1O88870 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC20.31■□□□□ 0.84
Best1O88870 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC20.31■□□□□ 0.84
Best1O88870 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC20.31■□□□□ 0.84
Best1O88870 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Best1O88870 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Best1O88870 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Best1O88870 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Best1O88870 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Best1O88870 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Best1O88870 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Best1O88870 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Best1O88870 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC20.3■□□□□ 0.84
Best1O88870 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Best1O88870 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Best1O88870 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Best1O88870 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Best1O88870 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC20.29■□□□□ 0.84
Best1O88870 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Best1O88870 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Best1O88870 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Best1O88870 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Best1O88870 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Best1O88870 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Best1O88870 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC20.28■□□□□ 0.84
Best1O88870 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Best1O88870 AC164883.3-201ENSMUST00000227396 1774 ntBASIC20.28■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms