Protein–RNA interactions for Protein: O55028

Bckdk, [3-methyl-2-oxobutanoate dehydrogenase [lipoamide]] kinase, mitochondrial, mousemouse

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BckdkO55028 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
BckdkO55028 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
BckdkO55028 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
BckdkO55028 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
BckdkO55028 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
BckdkO55028 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
BckdkO55028 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC19.41■□□□□ 0.7
BckdkO55028 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
BckdkO55028 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC19.41■□□□□ 0.7
BckdkO55028 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
BckdkO55028 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
BckdkO55028 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
BckdkO55028 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
BckdkO55028 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
BckdkO55028 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC19.4■□□□□ 0.7
BckdkO55028 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
BckdkO55028 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC19.4■□□□□ 0.7
BckdkO55028 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
BckdkO55028 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
BckdkO55028 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
BckdkO55028 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
BckdkO55028 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
BckdkO55028 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
BckdkO55028 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
BckdkO55028 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
BckdkO55028 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
BckdkO55028 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
BckdkO55028 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
BckdkO55028 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
BckdkO55028 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
BckdkO55028 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
BckdkO55028 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
BckdkO55028 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
BckdkO55028 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
BckdkO55028 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC19.38■□□□□ 0.69
BckdkO55028 AC153524.1-201ENSMUST00000220436 1935 ntBASIC19.38■□□□□ 0.69
BckdkO55028 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
BckdkO55028 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
BckdkO55028 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
BckdkO55028 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
BckdkO55028 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
BckdkO55028 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
BckdkO55028 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
BckdkO55028 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
BckdkO55028 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
BckdkO55028 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
BckdkO55028 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
BckdkO55028 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
BckdkO55028 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
BckdkO55028 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
BckdkO55028 Gm14117-201ENSMUST00000122417 843 ntBASIC19.36■□□□□ 0.69
BckdkO55028 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
BckdkO55028 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC19.36■□□□□ 0.69
BckdkO55028 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
BckdkO55028 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
BckdkO55028 Gm9959-201ENSMUST00000068277 390 ntBASIC19.35■□□□□ 0.69
BckdkO55028 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
BckdkO55028 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
BckdkO55028 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
BckdkO55028 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC19.35■□□□□ 0.69
BckdkO55028 AC115037.1-201ENSMUST00000223391 2173 ntBASIC19.34■□□□□ 0.69
BckdkO55028 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
BckdkO55028 Gm16464-201ENSMUST00000117815 1095 ntBASIC19.34■□□□□ 0.69
BckdkO55028 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
BckdkO55028 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
BckdkO55028 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
BckdkO55028 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
BckdkO55028 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
BckdkO55028 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
BckdkO55028 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC19.33■□□□□ 0.69
BckdkO55028 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
BckdkO55028 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC19.33■□□□□ 0.69
BckdkO55028 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
BckdkO55028 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
BckdkO55028 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
BckdkO55028 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
BckdkO55028 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
BckdkO55028 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
BckdkO55028 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
BckdkO55028 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
BckdkO55028 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
BckdkO55028 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC19.32■□□□□ 0.68
BckdkO55028 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
BckdkO55028 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
BckdkO55028 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC19.31■□□□□ 0.68
BckdkO55028 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC19.31■□□□□ 0.68
BckdkO55028 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
BckdkO55028 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC19.31■□□□□ 0.68
BckdkO55028 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
BckdkO55028 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
BckdkO55028 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
BckdkO55028 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC19.31■□□□□ 0.68
BckdkO55028 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
BckdkO55028 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
BckdkO55028 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
BckdkO55028 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
BckdkO55028 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
BckdkO55028 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC19.3■□□□□ 0.68
BckdkO55028 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
BckdkO55028 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 550.3 ms