Protein–RNA interactions for Protein: O54804

Chka, Choline kinase alpha, mousemouse

Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ChkaO54804 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
ChkaO54804 Cap2-205ENSMUST00000225824 1634 ntBASIC21.26■□□□□ 0.99
ChkaO54804 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC21.26■□□□□ 0.99
ChkaO54804 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC21.26■□□□□ 0.99
ChkaO54804 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC21.26■□□□□ 0.99
ChkaO54804 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
ChkaO54804 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
ChkaO54804 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
ChkaO54804 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC21.26■□□□□ 0.99
ChkaO54804 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
ChkaO54804 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
ChkaO54804 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC21.25■□□□□ 0.99
ChkaO54804 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
ChkaO54804 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
ChkaO54804 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC21.25■□□□□ 0.99
ChkaO54804 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
ChkaO54804 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
ChkaO54804 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
ChkaO54804 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
ChkaO54804 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
ChkaO54804 AC164883.3-201ENSMUST00000227396 1774 ntBASIC21.24■□□□□ 0.99
ChkaO54804 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
ChkaO54804 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
ChkaO54804 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
ChkaO54804 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
ChkaO54804 Gm43006-201ENSMUST00000197702 1602 ntBASIC21.23■□□□□ 0.99
ChkaO54804 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC21.23■□□□□ 0.99
ChkaO54804 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
ChkaO54804 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
ChkaO54804 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
ChkaO54804 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
ChkaO54804 Gm10420-201ENSMUST00000121713 882 ntBASIC21.22■□□□□ 0.99
ChkaO54804 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
ChkaO54804 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
ChkaO54804 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
ChkaO54804 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
ChkaO54804 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
ChkaO54804 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
ChkaO54804 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
ChkaO54804 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
ChkaO54804 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
ChkaO54804 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
ChkaO54804 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
ChkaO54804 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
ChkaO54804 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
ChkaO54804 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
ChkaO54804 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
ChkaO54804 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
ChkaO54804 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
ChkaO54804 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
ChkaO54804 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
ChkaO54804 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC21.2■□□□□ 0.98
ChkaO54804 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
ChkaO54804 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
ChkaO54804 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC21.19■□□□□ 0.98
ChkaO54804 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
ChkaO54804 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ChkaO54804 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ChkaO54804 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
ChkaO54804 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
ChkaO54804 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
ChkaO54804 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
ChkaO54804 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ChkaO54804 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
ChkaO54804 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ChkaO54804 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
ChkaO54804 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
ChkaO54804 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ChkaO54804 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ChkaO54804 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC21.17■□□□□ 0.98
ChkaO54804 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC21.17■□□□□ 0.98
ChkaO54804 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ChkaO54804 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
ChkaO54804 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC21.16■□□□□ 0.98
ChkaO54804 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ChkaO54804 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ChkaO54804 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
ChkaO54804 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
ChkaO54804 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
ChkaO54804 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
ChkaO54804 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC21.16■□□□□ 0.98
ChkaO54804 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
ChkaO54804 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
ChkaO54804 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC21.15■□□□□ 0.98
ChkaO54804 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
ChkaO54804 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
ChkaO54804 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.98
ChkaO54804 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
ChkaO54804 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
ChkaO54804 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
ChkaO54804 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
ChkaO54804 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
ChkaO54804 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC21.13■□□□□ 0.97
ChkaO54804 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
ChkaO54804 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
ChkaO54804 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
ChkaO54804 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
ChkaO54804 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC21.12■□□□□ 0.97
ChkaO54804 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
ChkaO54804 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms