Protein–RNA interactions for Protein: E9Q8Q6

Ccdc141, Coiled-coil domain-containing 141, mousemouse

Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc141E9Q8Q6 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC32.59■■■□□ 2.81
Ccdc141E9Q8Q6 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC32.58■■■□□ 2.81
Ccdc141E9Q8Q6 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC32.58■■■□□ 2.81
Ccdc141E9Q8Q6 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC32.58■■■□□ 2.81
Ccdc141E9Q8Q6 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC32.58■■■□□ 2.81
Ccdc141E9Q8Q6 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC32.58■■■□□ 2.81
Ccdc141E9Q8Q6 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC32.57■■■□□ 2.8
Ccdc141E9Q8Q6 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC32.57■■■□□ 2.8
Ccdc141E9Q8Q6 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC32.57■■■□□ 2.8
Ccdc141E9Q8Q6 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC32.57■■■□□ 2.8
Ccdc141E9Q8Q6 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC32.57■■■□□ 2.8
Ccdc141E9Q8Q6 Mir7075-201ENSMUST00000184187 82 ntBASIC32.56■■■□□ 2.8
Ccdc141E9Q8Q6 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC32.56■■■□□ 2.8
Ccdc141E9Q8Q6 AC158990.1-201ENSMUST00000221450 2016 ntBASIC32.56■■■□□ 2.8
Ccdc141E9Q8Q6 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC32.56■■■□□ 2.8
Ccdc141E9Q8Q6 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC32.56■■■□□ 2.8
Ccdc141E9Q8Q6 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC32.56■■■□□ 2.8
Ccdc141E9Q8Q6 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC32.56■■■□□ 2.8
Ccdc141E9Q8Q6 Krt8-ps-201ENSMUST00000208495 945 ntBASIC32.56■■■□□ 2.8
Ccdc141E9Q8Q6 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC32.55■■■□□ 2.8
Ccdc141E9Q8Q6 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC32.55■■■□□ 2.8
Ccdc141E9Q8Q6 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC32.55■■■□□ 2.8
Ccdc141E9Q8Q6 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC32.55■■■□□ 2.8
Ccdc141E9Q8Q6 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC32.55■■■□□ 2.8
Ccdc141E9Q8Q6 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC32.55■■■□□ 2.8
Ccdc141E9Q8Q6 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC32.54■■■□□ 2.8
Ccdc141E9Q8Q6 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC32.54■■■□□ 2.8
Ccdc141E9Q8Q6 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC32.54■■■□□ 2.8
Ccdc141E9Q8Q6 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC32.54■■■□□ 2.8
Ccdc141E9Q8Q6 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC32.53■■■□□ 2.8
Ccdc141E9Q8Q6 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC32.53■■■□□ 2.8
Ccdc141E9Q8Q6 Gm12251-201ENSMUST00000117893 792 ntBASIC32.53■■■□□ 2.8
Ccdc141E9Q8Q6 Gm43173-201ENSMUST00000202246 593 ntBASIC32.52■■■□□ 2.8
Ccdc141E9Q8Q6 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC32.52■■■□□ 2.8
Ccdc141E9Q8Q6 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC32.51■■■□□ 2.8
Ccdc141E9Q8Q6 Gm8770-201ENSMUST00000121113 1109 ntBASIC32.51■■■□□ 2.79
Ccdc141E9Q8Q6 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC32.51■■■□□ 2.79
Ccdc141E9Q8Q6 Gm10657-201ENSMUST00000193528 1031 ntBASIC32.51■■■□□ 2.79
Ccdc141E9Q8Q6 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC32.51■■■□□ 2.79
Ccdc141E9Q8Q6 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC32.5■■■□□ 2.79
Ccdc141E9Q8Q6 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC32.5■■■□□ 2.79
Ccdc141E9Q8Q6 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC32.5■■■□□ 2.79
Ccdc141E9Q8Q6 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC32.5■■■□□ 2.79
Ccdc141E9Q8Q6 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC32.49■■■□□ 2.79
Ccdc141E9Q8Q6 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC32.49■■■□□ 2.79
Ccdc141E9Q8Q6 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC32.49■■■□□ 2.79
Ccdc141E9Q8Q6 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC32.48■■■□□ 2.79
Ccdc141E9Q8Q6 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC32.48■■■□□ 2.79
Ccdc141E9Q8Q6 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC32.48■■■□□ 2.79
Ccdc141E9Q8Q6 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC32.48■■■□□ 2.79
Ccdc141E9Q8Q6 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC32.48■■■□□ 2.79
Ccdc141E9Q8Q6 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC32.47■■■□□ 2.79
Ccdc141E9Q8Q6 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC32.46■■■□□ 2.79
Ccdc141E9Q8Q6 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC32.46■■■□□ 2.79
Ccdc141E9Q8Q6 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC32.46■■■□□ 2.79
Ccdc141E9Q8Q6 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC32.46■■■□□ 2.79
Ccdc141E9Q8Q6 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC32.45■■■□□ 2.78
Ccdc141E9Q8Q6 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC32.45■■■□□ 2.78
Ccdc141E9Q8Q6 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC32.44■■■□□ 2.78
Ccdc141E9Q8Q6 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC32.44■■■□□ 2.78
Ccdc141E9Q8Q6 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC32.44■■■□□ 2.78
Ccdc141E9Q8Q6 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC32.44■■■□□ 2.78
Ccdc141E9Q8Q6 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC32.43■■■□□ 2.78
Ccdc141E9Q8Q6 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC32.43■■■□□ 2.78
Ccdc141E9Q8Q6 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC32.43■■■□□ 2.78
Ccdc141E9Q8Q6 Gm8493-201ENSMUST00000196881 489 ntBASIC32.43■■■□□ 2.78
Ccdc141E9Q8Q6 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC32.43■■■□□ 2.78
Ccdc141E9Q8Q6 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC32.43■■■□□ 2.78
Ccdc141E9Q8Q6 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC32.43■■■□□ 2.78
Ccdc141E9Q8Q6 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC32.42■■■□□ 2.78
Ccdc141E9Q8Q6 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC32.42■■■□□ 2.78
Ccdc141E9Q8Q6 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC32.42■■■□□ 2.78
Ccdc141E9Q8Q6 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC32.41■■■□□ 2.78
Ccdc141E9Q8Q6 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC32.4■■■□□ 2.78
Ccdc141E9Q8Q6 Gm5874-201ENSMUST00000096101 508 ntBASIC32.4■■■□□ 2.78
Ccdc141E9Q8Q6 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC32.4■■■□□ 2.78
Ccdc141E9Q8Q6 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC32.39■■■□□ 2.78
Ccdc141E9Q8Q6 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC32.39■■■□□ 2.78
Ccdc141E9Q8Q6 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC32.39■■■□□ 2.78
Ccdc141E9Q8Q6 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC32.39■■■□□ 2.77
Ccdc141E9Q8Q6 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC32.39■■■□□ 2.77
Ccdc141E9Q8Q6 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC32.38■■■□□ 2.77
Ccdc141E9Q8Q6 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC32.38■■■□□ 2.77
Ccdc141E9Q8Q6 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC32.38■■■□□ 2.77
Ccdc141E9Q8Q6 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC32.37■■■□□ 2.77
Ccdc141E9Q8Q6 Wdr70-203ENSMUST00000227371 1130 ntBASIC32.37■■■□□ 2.77
Ccdc141E9Q8Q6 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC32.36■■■□□ 2.77
Ccdc141E9Q8Q6 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC32.36■■■□□ 2.77
Ccdc141E9Q8Q6 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC32.36■■■□□ 2.77
Ccdc141E9Q8Q6 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC32.36■■■□□ 2.77
Ccdc141E9Q8Q6 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC32.36■■■□□ 2.77
Ccdc141E9Q8Q6 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC32.35■■■□□ 2.77
Ccdc141E9Q8Q6 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC32.35■■■□□ 2.77
Ccdc141E9Q8Q6 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC32.35■■■□□ 2.77
Ccdc141E9Q8Q6 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC32.35■■■□□ 2.77
Ccdc141E9Q8Q6 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC32.34■■■□□ 2.77
Ccdc141E9Q8Q6 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC32.34■■■□□ 2.77
Ccdc141E9Q8Q6 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC32.34■■■□□ 2.77
Ccdc141E9Q8Q6 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC32.33■■■□□ 2.77
Ccdc141E9Q8Q6 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC32.33■■■□□ 2.77
Retrieved 100 of 76,532 protein–RNA pairs in 44.8 ms