Protein–RNA interactions for Protein: E9Q735

Ube4a, Ubiquitin conjugation factor E4 A, mousemouse

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4aE9Q735 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
Ube4aE9Q735 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC25.66■■□□□ 1.7
Ube4aE9Q735 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
Ube4aE9Q735 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
Ube4aE9Q735 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC25.66■■□□□ 1.7
Ube4aE9Q735 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
Ube4aE9Q735 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
Ube4aE9Q735 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
Ube4aE9Q735 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
Ube4aE9Q735 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
Ube4aE9Q735 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC25.64■■□□□ 1.7
Ube4aE9Q735 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC25.64■■□□□ 1.7
Ube4aE9Q735 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
Ube4aE9Q735 Gm27454-201ENSMUST00000185090 204 ntBASIC25.63■■□□□ 1.69
Ube4aE9Q735 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
Ube4aE9Q735 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC25.63■■□□□ 1.69
Ube4aE9Q735 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
Ube4aE9Q735 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
Ube4aE9Q735 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC25.62■■□□□ 1.69
Ube4aE9Q735 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC25.62■■□□□ 1.69
Ube4aE9Q735 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC25.62■■□□□ 1.69
Ube4aE9Q735 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
Ube4aE9Q735 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
Ube4aE9Q735 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
Ube4aE9Q735 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
Ube4aE9Q735 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
Ube4aE9Q735 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC25.61■■□□□ 1.69
Ube4aE9Q735 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC25.61■■□□□ 1.69
Ube4aE9Q735 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
Ube4aE9Q735 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
Ube4aE9Q735 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC25.61■■□□□ 1.69
Ube4aE9Q735 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
Ube4aE9Q735 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC25.6■■□□□ 1.69
Ube4aE9Q735 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC25.6■■□□□ 1.69
Ube4aE9Q735 Gm9870-201ENSMUST00000063874 645 ntBASIC25.6■■□□□ 1.69
Ube4aE9Q735 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
Ube4aE9Q735 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC25.6■■□□□ 1.69
Ube4aE9Q735 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC25.59■■□□□ 1.69
Ube4aE9Q735 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC25.59■■□□□ 1.69
Ube4aE9Q735 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
Ube4aE9Q735 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC25.59■■□□□ 1.69
Ube4aE9Q735 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC25.58■■□□□ 1.69
Ube4aE9Q735 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
Ube4aE9Q735 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
Ube4aE9Q735 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC25.57■■□□□ 1.68
Ube4aE9Q735 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC25.57■■□□□ 1.68
Ube4aE9Q735 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC25.57■■□□□ 1.68
Ube4aE9Q735 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC25.57■■□□□ 1.68
Ube4aE9Q735 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC25.57■■□□□ 1.68
Ube4aE9Q735 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
Ube4aE9Q735 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC25.56■■□□□ 1.68
Ube4aE9Q735 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
Ube4aE9Q735 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
Ube4aE9Q735 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
Ube4aE9Q735 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
Ube4aE9Q735 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC25.56■■□□□ 1.68
Ube4aE9Q735 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Ube4aE9Q735 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
Ube4aE9Q735 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
Ube4aE9Q735 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC25.55■■□□□ 1.68
Ube4aE9Q735 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC25.55■■□□□ 1.68
Ube4aE9Q735 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
Ube4aE9Q735 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
Ube4aE9Q735 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
Ube4aE9Q735 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC25.54■■□□□ 1.68
Ube4aE9Q735 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
Ube4aE9Q735 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
Ube4aE9Q735 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC25.54■■□□□ 1.68
Ube4aE9Q735 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC25.53■■□□□ 1.68
Ube4aE9Q735 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC25.53■■□□□ 1.68
Ube4aE9Q735 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
Ube4aE9Q735 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
Ube4aE9Q735 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC25.53■■□□□ 1.68
Ube4aE9Q735 Gm45417-201ENSMUST00000209533 758 ntBASIC25.53■■□□□ 1.68
Ube4aE9Q735 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
Ube4aE9Q735 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC25.52■■□□□ 1.68
Ube4aE9Q735 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC25.52■■□□□ 1.68
Ube4aE9Q735 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
Ube4aE9Q735 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
Ube4aE9Q735 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC25.51■■□□□ 1.67
Ube4aE9Q735 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC25.51■■□□□ 1.67
Ube4aE9Q735 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC25.51■■□□□ 1.67
Ube4aE9Q735 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC25.51■■□□□ 1.67
Ube4aE9Q735 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
Ube4aE9Q735 H3f3aos-201ENSMUST00000097448 2905 ntBASIC25.51■■□□□ 1.67
Ube4aE9Q735 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
Ube4aE9Q735 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
Ube4aE9Q735 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
Ube4aE9Q735 Gm9207-201ENSMUST00000198773 1115 ntBASIC25.5■■□□□ 1.67
Ube4aE9Q735 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
Ube4aE9Q735 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC25.49■■□□□ 1.67
Ube4aE9Q735 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
Ube4aE9Q735 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
Ube4aE9Q735 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
Ube4aE9Q735 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
Ube4aE9Q735 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC25.48■■□□□ 1.67
Ube4aE9Q735 Kdm3b-204ENSMUST00000224715 2032 ntBASIC25.48■■□□□ 1.67
Ube4aE9Q735 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC25.48■■□□□ 1.67
Ube4aE9Q735 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
Ube4aE9Q735 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms