Protein–RNA interactions for Protein: E9PXF0

Pcdh17, Protocadherin 17, mousemouse

Predictions only

Length 1,157 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh17E9PXF0 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Pcdh17E9PXF0 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC19.54■□□□□ 0.72
Pcdh17E9PXF0 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Pcdh17E9PXF0 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Pcdh17E9PXF0 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Pcdh17E9PXF0 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Pcdh17E9PXF0 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Pcdh17E9PXF0 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Pcdh17E9PXF0 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Pcdh17E9PXF0 Gm9847-201ENSMUST00000052528 599 ntBASIC19.53■□□□□ 0.72
Pcdh17E9PXF0 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC19.53■□□□□ 0.72
Pcdh17E9PXF0 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Pcdh17E9PXF0 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Pcdh17E9PXF0 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC19.52■□□□□ 0.71
Pcdh17E9PXF0 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.71
Pcdh17E9PXF0 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.71
Pcdh17E9PXF0 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Pcdh17E9PXF0 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Pcdh17E9PXF0 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC19.51■□□□□ 0.71
Pcdh17E9PXF0 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Pcdh17E9PXF0 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Pcdh17E9PXF0 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Pcdh17E9PXF0 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Pcdh17E9PXF0 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Pcdh17E9PXF0 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Pcdh17E9PXF0 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Pcdh17E9PXF0 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Pcdh17E9PXF0 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Pcdh17E9PXF0 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Pcdh17E9PXF0 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Pcdh17E9PXF0 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC19.5■□□□□ 0.71
Pcdh17E9PXF0 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Pcdh17E9PXF0 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Pcdh17E9PXF0 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Pcdh17E9PXF0 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Pcdh17E9PXF0 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Pcdh17E9PXF0 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC19.49■□□□□ 0.71
Pcdh17E9PXF0 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
Pcdh17E9PXF0 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Pcdh17E9PXF0 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Pcdh17E9PXF0 Gm10620-201ENSMUST00000098379 1332 ntBASIC19.49■□□□□ 0.71
Pcdh17E9PXF0 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
Pcdh17E9PXF0 Gm43034-201ENSMUST00000198678 1364 ntBASIC19.48■□□□□ 0.71
Pcdh17E9PXF0 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Pcdh17E9PXF0 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Pcdh17E9PXF0 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Pcdh17E9PXF0 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Pcdh17E9PXF0 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Pcdh17E9PXF0 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Pcdh17E9PXF0 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Pcdh17E9PXF0 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Pcdh17E9PXF0 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Pcdh17E9PXF0 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Pcdh17E9PXF0 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC19.47■□□□□ 0.71
Pcdh17E9PXF0 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC19.47■□□□□ 0.71
Pcdh17E9PXF0 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Pcdh17E9PXF0 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Pcdh17E9PXF0 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Pcdh17E9PXF0 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Pcdh17E9PXF0 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Pcdh17E9PXF0 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Pcdh17E9PXF0 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Pcdh17E9PXF0 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Pcdh17E9PXF0 Gm21956-201ENSMUST00000179946 522 ntBASIC19.46■□□□□ 0.71
Pcdh17E9PXF0 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Pcdh17E9PXF0 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Pcdh17E9PXF0 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pcdh17E9PXF0 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pcdh17E9PXF0 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC19.45■□□□□ 0.7
Pcdh17E9PXF0 Gm12922-201ENSMUST00000120626 809 ntBASIC19.45■□□□□ 0.7
Pcdh17E9PXF0 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC19.45■□□□□ 0.7
Pcdh17E9PXF0 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC19.45■□□□□ 0.7
Pcdh17E9PXF0 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pcdh17E9PXF0 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pcdh17E9PXF0 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pcdh17E9PXF0 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC19.44■□□□□ 0.7
Pcdh17E9PXF0 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pcdh17E9PXF0 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pcdh17E9PXF0 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pcdh17E9PXF0 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pcdh17E9PXF0 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Pcdh17E9PXF0 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Pcdh17E9PXF0 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC19.43■□□□□ 0.7
Pcdh17E9PXF0 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Pcdh17E9PXF0 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pcdh17E9PXF0 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Pcdh17E9PXF0 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Pcdh17E9PXF0 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC19.42■□□□□ 0.7
Pcdh17E9PXF0 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Pcdh17E9PXF0 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Pcdh17E9PXF0 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Pcdh17E9PXF0 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pcdh17E9PXF0 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pcdh17E9PXF0 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Pcdh17E9PXF0 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pcdh17E9PXF0 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Pcdh17E9PXF0 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pcdh17E9PXF0 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC19.41■□□□□ 0.7
Pcdh17E9PXF0 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pcdh17E9PXF0 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 17.5 ms